RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF365Q70YC5 407 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 C11orf96Q7Z7L8 435 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 PPFIBP1Q86W92 1011 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 RNF10Q8N5U6 811 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 AZIN2Q96A70 460 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 CHAMP1Q96JM3 812 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 CCT7Q99832 543 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 LRRC27Q9C0I9 530 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 IL20Q9NYY1 176 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 CFAP45Q9UL16 551 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 TMCC3Q9ULS5 477 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 MAFFQ9ULX9 164 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 DIS3Q9Y2L1 958 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 LUC7L2Q9Y383 392 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 SQORQ9Y6N5 450 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 MYOM2P54296 1465 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 DYTNA2CJ06 578 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 ACADVLP49748 655 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 TRIM29Q14134 588 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 ANO6Q4KMQ2 910 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 SLC44A4Q53GD3 710 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 KAZNQ674X7 775 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 CEP128Q6ZU80 1094 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 RAB11FIP4Q86YS3 637 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
COMMD3-215ENST00000602574 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 HPS3Q969F9 1004 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 EPSTI1Q96J88 318 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 DDX19AQ9NUU7 478 aaKnown RBP9.82□□□□□ -0.84
COMMD3-215ENST00000602574 HPCAL4Q9UM19 191 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 L3MBTL1Q9Y468 752 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 SLC26A4O43511 780 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 SGTAO43765 313 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 BAG3O95817 575 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 EPB41P11171 864 aaKnown RBP9.82□□□□□ -0.84
COMMD3-215ENST00000602574 ELF3P78545 371 aaPredicted RBP9.82□□□□□ -0.84
COMMD3-215ENST00000602574 STIM1Q13586 685 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 RASA2Q15283 850 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 CCDC110Q8TBZ0 833 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 CCDC28BQ9BUN5 200 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 ZCWPW1Q9H0M4 648 aa9.82□□□□□ -0.84
COMMD3-215ENST00000602574 DIAPH2O60879 1101 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 PARNO95453 639 aaKnown RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 CLTAP09496 248 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 POTEIP0CG38 1075 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 CCND1P24385 295 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 SERPINB8P50452 374 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 MTTPP55157 894 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 ADAM9Q13443 819 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 MUM1Q2TAK8 710 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 STKLD1Q8NE28 680 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 RUNDC1Q96C34 613 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 FGD4Q96M96 766 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 SIL1Q9H173 461 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 EPN3Q9H201 632 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 EPC1Q9H2F5 836 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 VCXQ9H320 206 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 RMND1Q9NWS8 449 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 TTC7AQ9ULT0 858 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 DDX19BQ9UMR2 479 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 NOSIPQ9Y314 301 aaKnown RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 INO80Q9ULG1 1556 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 SETBP1Q9Y6X0 1596 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 RGS12O14924 1447 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 CFAP73A6NFT4 308 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 APAF1O14727 1248 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 GSTA1P08263 222 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 PDE6BP35913 854 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 STAT6P42226 847 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 ZNF165P49910 485 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 MRPS25P82663 173 aaKnown RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 ANKRD20A8PQ5CZ79 823 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 NAA35Q5VZE5 725 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 SLC2A7Q6PXP3 512 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 CCBE1Q6UXH8 406 aaPredicted RBP9.81□□□□□ -0.84
COMMD3-215ENST00000602574 LURAP1LQ8IV03 231 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 WDR60Q8WVS4 1066 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 PARVGQ9HBI0 331 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 INIPQ9NRY2 104 aa9.81□□□□□ -0.84
COMMD3-215ENST00000602574 NCKAP5LQ9HCH0 1330 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 CUTAO60888 179 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 PHACTR2O75167 634 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 POLR2EP19388 210 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 COX10Q12887 443 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 DAAM2Q86T65 1068 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 SCAIQ8N9R8 606 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 CNBD1Q8NA66 436 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 DQX1Q8TE96 717 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
COMMD3-215ENST00000602574 HNRNPABQ99729 332 aaKnown RBP9.8□□□□□ -0.84
COMMD3-215ENST00000602574 CENPOQ9BU64 300 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms