RNA–Protein interactions for RNA: ENST00000600944.5

CPT1C-223, Transcript of carnitine palmitoyltransferase 1C, human

TSL 2

Gene CPT1C, Length 1,027 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPT1C-223	ENST00000600944	CLEC10A	Q8IUN9	316 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	DDX11	Q96FC9	970 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	UIMC1	Q96RL1	719 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	PCDHA11	Q9Y5I1	949 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	FPGT-TNNI3K	V9GXZ4	949 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	CHD9	Q3L8U1	2897 aa		18.87	■□□□□ 0.61
CPT1C-223	ENST00000600944	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	UMODL1	Q5DID0	1318 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	WDR46	O15213	610 aa	Known RBP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	ATP2A2	P16615	1042 aa	Known RBP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	CST5	P28325	142 aa	Predicted RBP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	SLC4A3	P48751	1232 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	MRE11	P49959	708 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	HLA-C	Q95604	372 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	VCPKMT	Q9H867	229 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	C11orf16	Q9NQ32	467 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	MCM9	Q9NXL9	1143 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	MTCH2	Q9Y6C9	303 aa		18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.86	■□□□□ 0.61
CPT1C-223	ENST00000600944	SMIM22	K7EJ46	135 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	IGSF3	O75054	1194 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	COPB2	P35606	906 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	KRT40	Q6A162	431 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	SNX27	Q96L92	541 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	FBXO28	Q9NVF7	368 aa		18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.85	■□□□□ 0.61
CPT1C-223	ENST00000600944	TLL1	O43897	1013 aa		18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	SNAI1	O95863	264 aa	Predicted RBP	18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	CA3	P07451	260 aa		18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	TMEM67	Q5HYA8	995 aa		18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	NOL8	Q76FK4	1167 aa	Known RBP	18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	MSL3	Q8N5Y2	521 aa	Known RBP	18.84	■□□□□ 0.61
CPT1C-223	ENST00000600944	PNMA6E	A0A0J9YXQ4	647 aa		18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	EVX2	Q03828	476 aa		18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	ACVR2B	Q13705	512 aa		18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	RPUSD2	Q8IZ73	545 aa	Known RBP	18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	ARNTL2	Q8WYA1	636 aa		18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	TMX2	Q9Y320	296 aa		18.83	■□□□□ 0.6
CPT1C-223	ENST00000600944	NAV1	Q8NEY1	1877 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	VWA5A	O00534	786 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	ANP32C	O43423	234 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	GNAI2	P04899	355 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	BEX3	Q00994	111 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	GABPA	Q06546	454 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	CSPP1	Q1MSJ5	1256 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	CCDC144B	Q3MJ40	725 aa		18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.82	■□□□□ 0.6
CPT1C-223	ENST00000600944	CHD7	Q9P2D1	2997 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	COL11A1	P12107	1806 aa	Predicted RBP	18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	MAGEB6P1	A0A0J9YX57	407 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	ADCY6	O43306	1168 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	CD4	P01730	458 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	GJA9	P57773	515 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	SNRNP48	Q6IEG0	339 aa	Known RBP	18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	CXCL17	Q6UXB2	119 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	SCLY	Q96I15	445 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	GPR108	Q9NPR9	543 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	PPP1R9A	Q9ULJ8	1098 aa		18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.81	■□□□□ 0.6
CPT1C-223	ENST00000600944	PRR33	A8MZF0	331 aa		18.8	■□□□□ 0.6
CPT1C-223	ENST00000600944	AKR1B1	P15121	316 aa		18.8	■□□□□ 0.6
CPT1C-223	ENST00000600944	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.8	■□□□□ 0.6
CPT1C-223	ENST00000600944	UPF3A	Q9H1J1	476 aa	Known RBP	18.8	■□□□□ 0.6
CPT1C-223	ENST00000600944	ZNF214	Q9UL59	606 aa	Predicted RBP	18.8	■□□□□ 0.6
CPT1C-223	ENST00000600944	EPOP	A6NHQ4	379 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	PI4K2B	G5E9Z4	385 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	CYP2D6	P10635	497 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	SSTR3	P32745	418 aa	Predicted RBP	18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	FAM83B	Q5T0W9	1011 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	DEFB128	Q7Z7B8	93 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	DYNLL2	Q96FJ2	89 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	NOC4L	Q9BVI4	516 aa	Known RBP	18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	TEX13B	Q9BXU2	312 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	WNT8A	Q9H1J5	351 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	ABHD16B	Q9H3Z7	469 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	GOPC	Q9HD26	462 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	TLR7	Q9NYK1	1049 aa	Known RBP	18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	SWAP70	Q9UH65	585 aa		18.79	■□□□□ 0.6
CPT1C-223	ENST00000600944	POU3F3	P20264	500 aa	Predicted RBP	18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	SLFN5	Q08AF3	891 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	ITGA7	Q13683	1181 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	TTLL4	Q14679	1199 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	MAMDC4	Q6UXC1	1216 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	SDR42E1	Q8WUS8	393 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	RIOK1	Q9BRS2	568 aa	Known RBP	18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	TRPV6	Q9H1D0	765 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	ANTXR1	Q9H6X2	564 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	DBNL	Q9UJU6	430 aa	Known RBP	18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	ADAMTS5	Q9UNA0	930 aa		18.78	■□□□□ 0.6
CPT1C-223	ENST00000600944	ARMCX2	Q7L311	632 aa		18.77	■□□□□ 0.6
CPT1C-223	ENST00000600944	SIAH1	Q8IUQ4	282 aa		18.77	■□□□□ 0.6
CPT1C-223	ENST00000600944	CPXCR1	Q8N123	301 aa		18.77	■□□□□ 0.6
CPT1C-223	ENST00000600944	ANKRD35	Q8N283	1001 aa		18.77	■□□□□ 0.6
CPT1C-223	ENST00000600944	CD320	Q9NPF0	282 aa		18.77	■□□□□ 0.6
CPT1C-223	ENST00000600944	PARP14	Q460N5	1801 aa		18.77	■□□□□ 0.59
CPT1C-223	ENST00000600944	REV3L	O60673	3130 aa		18.76	■□□□□ 0.59
CPT1C-223	ENST00000600944	B4GALT4	O60513	344 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms