RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 STK3Q13188 491 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 PKP1Q13835 747 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 KIF22Q14807 665 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 SEC23AQ15436 765 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-211ENST00000600927 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-211ENST00000600927 MAP3K14Q99558 947 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
ZNF548-211ENST00000600927 FEZ1Q99689 392 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 KANSL2Q9H9L4 492 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
ZNF548-211ENST00000600927 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
ZNF548-211ENST00000600927 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 CPLX1O14810 134 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.27
ZNF548-211ENST00000600927 FCGRTP55899 365 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
ZNF548-211ENST00000600927 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 ZYXQ15942 572 aaKnown RBP13.38□□□□□ -0.27
ZNF548-211ENST00000600927 CSPP1Q1MSJ5 1256 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 ATL3Q6DD88 541 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 LPAR1Q92633 364 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 TOMM22Q9NS69 142 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 RBPJLQ9UBG7 517 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 PTCH2Q9Y6C5 1203 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
ZNF548-211ENST00000600927 PTPDC1A2A3K4 754 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 CNMDO75829 334 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 IFNAR1P17181 557 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 RGS19P49795 217 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 RRP12Q5JTH9 1297 aaKnown RBP13.37□□□□□ -0.27
ZNF548-211ENST00000600927 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-211ENST00000600927 SH2D4AQ9H788 454 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 ARHGEF10LQ9HCE6 1279 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 RBM28Q9NW13 759 aaKnown RBP13.37□□□□□ -0.27
ZNF548-211ENST00000600927 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 STK36Q9NRP7 1315 aa13.37□□□□□ -0.27
ZNF548-211ENST00000600927 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
ZNF548-211ENST00000600927 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
ZNF548-211ENST00000600927 PRDM1O75626 825 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 DDAH1O94760 285 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
ZNF548-211ENST00000600927 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
ZNF548-211ENST00000600927 PRKCZQ05513 592 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 WASF1Q92558 559 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 ZNF333Q96JL9 665 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
ZNF548-211ENST00000600927 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 INCENPQ9NQS7 918 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 TNKSO95271 1327 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 MYPNQ86TC9 1320 aa13.36□□□□□ -0.27
ZNF548-211ENST00000600927 TSPY2A6NKD2 308 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
ZNF548-211ENST00000600927 PEX10O60683 326 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
ZNF548-211ENST00000600927 HOXD10P28358 340 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 NOVP48745 357 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 ERVK-24P63145 666 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 NTRK3Q16288 839 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
ZNF548-211ENST00000600927 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 MKL1Q969V6 931 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
ZNF548-211ENST00000600927 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
ZNF548-211ENST00000600927 H3BQV1 296 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 TRAK2O60296 914 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 JAK2O60674 1132 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
ZNF548-211ENST00000600927 IRF5Q13568 498 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
ZNF548-211ENST00000600927 Q3C1V9 767 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms