RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 ADAMTS5Q9UNA0 930 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 TAF6LQ9Y6J9 622 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 FRMPD2Q68DX3 1309 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-223ENST00000600523 STRNO43815 780 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CALM1P0DP23 149 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CALM2P0DP24 149 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CALM3P0DP25 149 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 KIF5BP33176 963 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 SEC23AQ15436 765 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 SLC9C1Q4G0N8 1177 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 BLOC1S2Q6QNY1 142 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-223ENST00000600523 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
SRRM1-223ENST00000600523 MOV10L1Q9BXT6 1211 aaKnown RBP15.19■□□□□ 0.02
SRRM1-223ENST00000600523 USP26Q9BXU7 913 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 SLC38A10Q9HBR0 1119 aa15.19■□□□□ 0.02
SRRM1-223ENST00000600523 CNMDO75829 334 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 SNHG28P0DPA3 235 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 FCER1AP12319 257 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 LIFRP42702 1097 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 SLC4A3P48751 1232 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 Q3C1V9 767 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 SNRNP48Q6IEG0 339 aaKnown RBP15.18■□□□□ 0.02
SRRM1-223ENST00000600523 GPR142Q7Z601 462 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 RIOX2Q8IUF8 465 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 PORCNQ9H237 461 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 BIN2Q9UBW5 565 aaPredicted RBP15.18■□□□□ 0.02
SRRM1-223ENST00000600523 FBXO40Q9UH90 709 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 PRR12Q9ULL5 1215 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
SRRM1-223ENST00000600523 SLC15A5A6NIM6 579 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 DDAH1O94760 285 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 ERCC3P19447 782 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 RGS2P41220 211 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 FLT3LGP49771 235 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 ANTXR2P58335 489 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 PRKCZQ05513 592 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 KCTD2Q14681 263 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 TRMT44Q8IYL2 757 aaKnown RBP15.17■□□□□ 0.02
SRRM1-223ENST00000600523 SLAIN1Q8ND83 568 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 IGDCC4Q8TDY8 1250 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 KCNB2Q92953 911 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
SRRM1-223ENST00000600523 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
SRRM1-223ENST00000600523 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
SRRM1-223ENST00000600523 PEX10O60683 326 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
SRRM1-223ENST00000600523 SLC16A2P36021 539 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 GNAQP50148 359 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 TRAF1Q13077 416 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 IRF5Q13568 498 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 TKFCQ3LXA3 575 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 DPP9Q86TI2 863 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 ABRAQ8N0Z2 381 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 CHST13Q8NET6 341 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 MAP3K14Q99558 947 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 RAVER2Q9HCJ3 691 aaKnown RBP15.16■□□□□ 0.02
SRRM1-223ENST00000600523 ZNF214Q9UL59 606 aaPredicted RBP15.16■□□□□ 0.02
SRRM1-223ENST00000600523 HPS5Q9UPZ3 1129 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 PTCH2Q9Y6C5 1203 aa15.16■□□□□ 0.02
SRRM1-223ENST00000600523 KLRF2D3W0D1 207 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 ADCY3O60266 1144 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 GOLGA8HP0CJ92 632 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 PTPREP23469 700 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 CTGFP29279 349 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 GRK4P32298 578 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 ANAPC15P60006 121 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 UBXN2AP68543 259 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 TTBK2Q6IQ55 1244 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 PXYLP1Q8TE99 480 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 ABHD8Q96I13 439 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 MMP19Q99542 508 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
SRRM1-223ENST00000600523 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
SRRM1-223ENST00000600523 ICAM1P05362 532 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
SRRM1-223ENST00000600523 CYP2B6P20813 491 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 RPS6KB1P23443 525 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 MAP2K5Q13163 448 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 GRM4Q14833 912 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms