RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
VRK3-218ENST00000600031 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 FZD1Q9UP38 647 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 ZC3H4Q9UPT8 1303 aaKnown RBP17.44■□□□□ 0.38
VRK3-218ENST00000600031 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 PPP2R3BQ9Y5P8 575 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 DLK2Q6UY11 383 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
VRK3-218ENST00000600031 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
VRK3-218ENST00000600031 FOXP1Q9H334 677 aaPredicted RBP17.44■□□□□ 0.38
VRK3-218ENST00000600031 SYNPO2Q9UMS6 1093 aa17.44■□□□□ 0.38
VRK3-218ENST00000600031 INPP5BP32019 993 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 ATL3Q6DD88 541 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 HEATR3Q7Z4Q2 680 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 ADGRF4Q8IZF3 695 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 GMCL1Q96IK5 515 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 ZNF341Q9BYN7 854 aa17.43■□□□□ 0.38
VRK3-218ENST00000600031 STXBP3O00186 592 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
VRK3-218ENST00000600031 EPHX2P34913 555 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 NLRP5P59047 1200 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 SPICE1Q8N0Z3 855 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 ZNF112Q9UJU3 913 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 ELP1O95163 1332 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 KRT2P35908 639 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 DCPSQ96C86 337 aaKnown RBP17.42■□□□□ 0.38
VRK3-218ENST00000600031 HOOK2Q96ED9 719 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
VRK3-218ENST00000600031 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
VRK3-218ENST00000600031 ADM5C9JUS6 153 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
VRK3-218ENST00000600031 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
VRK3-218ENST00000600031 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 POTECB2RU33 542 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 BMP3P12645 472 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
VRK3-218ENST00000600031 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
VRK3-218ENST00000600031 EARS2Q5JPH6 523 aaKnown RBP17.4■□□□□ 0.38
VRK3-218ENST00000600031 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
VRK3-218ENST00000600031 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
VRK3-218ENST00000600031 ZKSCAN4Q969J2 545 aaPredicted RBP17.4■□□□□ 0.38
VRK3-218ENST00000600031 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
VRK3-218ENST00000600031 GOPCQ9HD26 462 aa17.4■□□□□ 0.38
VRK3-218ENST00000600031 FAM205CA6NFA0 338 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.38
VRK3-218ENST00000600031 SUPT20HL1Q3ZLR7 823 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.38
VRK3-218ENST00000600031 PGBD1Q96JS3 809 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 VCPKMTQ9H867 229 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 GINM1Q9NU53 330 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.38
VRK3-218ENST00000600031 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
VRK3-218ENST00000600031 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.37
VRK3-218ENST00000600031 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
VRK3-218ENST00000600031 LINC00301Q8NCQ3 95 aa17.39■□□□□ 0.37
VRK3-218ENST00000600031 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
VRK3-218ENST00000600031 TAF1DQ9H5J8 278 aaPredicted RBP17.39■□□□□ 0.37
VRK3-218ENST00000600031 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
VRK3-218ENST00000600031 CALML3P27482 149 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 NAPAP54920 295 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 PRKG1Q13976 671 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 KRT26Q7Z3Y9 468 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 COA7Q96BR5 231 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 PRKCSHP14314 528 aaPredicted RBP17.38■□□□□ 0.37
VRK3-218ENST00000600031 SF3A1Q15459 793 aaKnown RBP17.38■□□□□ 0.37
VRK3-218ENST00000600031 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 ZMYND12Q9H0C1 365 aa17.38■□□□□ 0.37
VRK3-218ENST00000600031 SCN4AP35499 1836 aa17.37■□□□□ 0.37
VRK3-218ENST00000600031 ZBTB5O15062 677 aa17.37■□□□□ 0.37
VRK3-218ENST00000600031 USP2O75604 605 aaPredicted RBP17.37■□□□□ 0.37
VRK3-218ENST00000600031 YEATS4O95619 227 aa17.37■□□□□ 0.37
VRK3-218ENST00000600031 IKQ13123 557 aaPredicted RBP17.37■□□□□ 0.37
VRK3-218ENST00000600031 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
VRK3-218ENST00000600031 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
VRK3-218ENST00000600031 ZC3H15Q8WU90 426 aaKnown RBP17.37■□□□□ 0.37
VRK3-218ENST00000600031 FEZ1Q99689 392 aa17.37■□□□□ 0.37
VRK3-218ENST00000600031 IQCA1LA6NCM1 817 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms