RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 BLOC1S2Q6QNY1 142 aa21.29■■□□□ 1
LIG1-216ENST00000598938 GTF3C2Q8WUA4 911 aaPredicted RBP21.29■■□□□ 1
LIG1-216ENST00000598938 DPF3Q92784 378 aa21.29■■□□□ 1
LIG1-216ENST00000598938 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
LIG1-216ENST00000598938 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
LIG1-216ENST00000598938 PARP14Q460N5 1801 aa21.29■■□□□ 1
LIG1-216ENST00000598938 FLOT1O75955 427 aa21.28■■□□□ 1
LIG1-216ENST00000598938 FMNL1O95466 1100 aaPredicted RBP21.28■■□□□ 1
LIG1-216ENST00000598938 BCRP11274 1271 aa21.28■■□□□ 1
LIG1-216ENST00000598938 CPA1P15085 419 aa21.28■■□□□ 1
LIG1-216ENST00000598938 DSG3P32926 999 aa21.28■■□□□ 1
LIG1-216ENST00000598938 LIFRP42702 1097 aa21.28■■□□□ 1
LIG1-216ENST00000598938 POTEEQ6S8J3 1075 aa21.28■■□□□ 1
LIG1-216ENST00000598938 SLAIN1Q8ND83 568 aa21.28■■□□□ 1
LIG1-216ENST00000598938 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
LIG1-216ENST00000598938 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
LIG1-216ENST00000598938 FBXO28Q9NVF7 368 aa21.28■■□□□ 1
LIG1-216ENST00000598938 HOXC10Q9NYD6 342 aa21.28■■□□□ 1
LIG1-216ENST00000598938 RBM27Q9P2N5 1060 aaKnown RBP21.28■■□□□ 1
LIG1-216ENST00000598938 FEM1BQ9UK73 627 aa21.28■■□□□ 1
LIG1-216ENST00000598938 MTMR7Q9Y216 660 aa21.28■■□□□ 1
LIG1-216ENST00000598938 A0A0G2JMZ2 1700 aa21.27■■□□□ 1
LIG1-216ENST00000598938 A0A1W2PPC1 479 aa21.27■■□□□ 1
LIG1-216ENST00000598938 PLA2G6O60733 806 aa21.27■■□□□ 1
LIG1-216ENST00000598938 CCL5P13501 91 aa21.27■■□□□ 1
LIG1-216ENST00000598938 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
LIG1-216ENST00000598938 RPS6KB1P23443 525 aa21.27■■□□□ 1
LIG1-216ENST00000598938 FCGRTP55899 365 aa21.27■■□□□ 1
LIG1-216ENST00000598938 KCTD1Q719H9 257 aa21.27■■□□□ 1
LIG1-216ENST00000598938 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
LIG1-216ENST00000598938 PRO3102Q9H379 93 aa21.27■■□□□ 1
LIG1-216ENST00000598938 MORF4L1Q9UBU8 362 aa21.27■■□□□ 1
LIG1-216ENST00000598938 PPP1R9AQ9ULJ8 1098 aa21.27■■□□□ 1
LIG1-216ENST00000598938 NR2E3Q9Y5X4 410 aa21.27■■□□□ 1
LIG1-216ENST00000598938 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 ZNF543Q08ER8 600 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 CCDC96Q2M329 555 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 SLF1Q9BQI6 1058 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 RBPJLQ9UBG7 517 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 ADAMTS5Q9UNA0 930 aa21.26■□□□□ 0.99
LIG1-216ENST00000598938 CNMDO75829 334 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 STAT2P52630 851 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 FAM110CQ1W6H9 321 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 RUFY3Q7L099 469 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 FAM160B2Q86V87 743 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 SGMS1Q86VZ5 419 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 FBXL16Q8N461 479 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 PRPF38AQ8NAV1 312 aaKnown RBP21.25■□□□□ 0.99
LIG1-216ENST00000598938 ATG4CQ96DT6 458 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 TXNRD2Q9NNW7 524 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 RABGAP1Q9Y3P9 1069 aa21.25■□□□□ 0.99
LIG1-216ENST00000598938 TROAPQ12815 778 aa21.24■□□□□ 0.99
LIG1-216ENST00000598938 GPATCH4Q5T3I0 446 aaKnown RBP21.24■□□□□ 0.99
LIG1-216ENST00000598938 BTNL9Q6UXG8 535 aa21.24■□□□□ 0.99
LIG1-216ENST00000598938 ANKRD13CQ8N6S4 541 aa21.24■□□□□ 0.99
LIG1-216ENST00000598938 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
LIG1-216ENST00000598938 ISY1Q9ULR0 285 aaKnown RBP21.24■□□□□ 0.99
LIG1-216ENST00000598938 CYP46A1Q9Y6A2 500 aa21.24■□□□□ 0.99
LIG1-216ENST00000598938 FRMPD2Q68DX3 1309 aaPredicted RBP21.24■□□□□ 0.99
LIG1-216ENST00000598938 CCDC69A6NI79 296 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 VWA5AO00534 786 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 PRKCZQ05513 592 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 ASPRV1Q53RT3 343 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 NFXL1Q6ZNB6 911 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 Q6ZUG5 572 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 CATIPQ7Z7H3 387 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 ZNF654Q8IZM8 581 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 MB21D1Q8N884 522 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 U2AF1L4Q8WU68 220 aaKnown RBP21.23■□□□□ 0.99
LIG1-216ENST00000598938 KIFC2Q96AC6 838 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 AGXT2Q9BYV1 514 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 C22orf23Q9BZE7 217 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 GPCPD1Q9NPB8 672 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 BTBD7Q9P203 1132 aa21.23■□□□□ 0.99
LIG1-216ENST00000598938 BIN2Q9UBW5 565 aaPredicted RBP21.23■□□□□ 0.99
LIG1-216ENST00000598938 PEX10O60683 326 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 DDAH1O94760 285 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 FARP2O94887 1054 aaPredicted RBP21.22■□□□□ 0.99
LIG1-216ENST00000598938 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
LIG1-216ENST00000598938 ERVK-9P63128 1117 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 ERVK-24P63145 666 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 GRM4Q14833 912 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 TTBK2Q6IQ55 1244 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 SAMD1Q6SPF0 538 aaPredicted RBP21.22■□□□□ 0.99
LIG1-216ENST00000598938 REPS2Q8NFH8 660 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 GPRC5AQ8NFJ5 357 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 PXYLP1Q8TE99 480 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 MAP3K14Q99558 947 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 PAGR1Q9BTK6 254 aa21.22■□□□□ 0.99
LIG1-216ENST00000598938 UPF3BQ9BZI7 483 aaKnown RBP21.22■□□□□ 0.99
LIG1-216ENST00000598938 SGPL1O95470 568 aa21.21■□□□□ 0.99
LIG1-216ENST00000598938 PARP1P09874 1014 aaKnown RBP21.21■□□□□ 0.99
LIG1-216ENST00000598938 GOLGA8HP0CJ92 632 aa21.21■□□□□ 0.99
LIG1-216ENST00000598938 IKQ13123 557 aaPredicted RBP21.21■□□□□ 0.99
LIG1-216ENST00000598938 UPF2Q9HAU5 1272 aaKnown RBP21.21■□□□□ 0.99
LIG1-216ENST00000598938 MAD2L2Q9UI95 211 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms