RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 USP17L17D6RBQ6 530 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 USP17L19D6RCP7 530 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 USP17L20D6RJB6 530 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 H7C1W4 665 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 MBTPS2O43462 519 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 STRNO43815 780 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 CSF1RP07333 972 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 AKR1A1P14550 325 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 NUBP1P53384 320 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 ATXN1P54253 815 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 USP17L24Q0WX57 530 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 GCKRQ14397 625 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 RRP1BQ14684 758 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 SMAD2Q15796 467 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 NOL8Q76FK4 1167 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 FBXO33Q7Z6M2 555 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 TMEM105Q8N8V8 129 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 CYP2W1Q8TAV3 490 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 PHOSPHO2Q8TCD6 241 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 MAML3Q96JK9 1138 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 RIPOR3Q96MK2 946 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 FEZ1Q99689 392 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 NOC4LQ9BVI4 516 aaKnown RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 TBC1D2Q9BYX2 928 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 WNT8AQ9H1J5 351 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 MFSD1Q9H3U5 465 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 CTNNA3Q9UI47 895 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 ZHX1Q9UKY1 873 aaPredicted RBP5.55□□□□□ -1.52
HERC3-213ENST00000598772 TIMELESSQ9UNS1 1208 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 CNPY2Q9Y2B0 182 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 KMT2EQ8IZD2 1858 aa5.55□□□□□ -1.52
HERC3-213ENST00000598772 ASH1LQ9NR48 2969 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 MYO7AQ13402 2215 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 PI4KAP2A4QPH2 592 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 ADAMTS4O75173 837 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 PGK2P07205 417 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 ADRB1P08588 477 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 HSPA5P11021 654 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 CYP2C9P11712 490 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 ERCC3P19447 782 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 MAP3K10Q02779 954 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 DLX2Q07687 328 aaPredicted RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 VARS2Q5ST30 1063 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 LURAP1LQ8IV03 231 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 PI4KAP1Q8N8J0 262 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 KLHDC9Q8NEP7 349 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 MRPL38Q96DV4 380 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 ASIC4Q96FT7 647 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 C17orf80Q9BSJ5 609 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 WDR18Q9BV38 432 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 TRIM34Q9BYJ4 488 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 DDX4Q9NQI0 724 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 EMILIN3Q9NT22 766 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 CDV3Q9UKY7 258 aaKnown RBP5.54□□□□□ -1.52
HERC3-213ENST00000598772 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 SUGT1Q9Y2Z0 365 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 PCDHGC5Q9Y5F6 944 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 R4GN57 208 aa5.54□□□□□ -1.52
HERC3-213ENST00000598772 NEURL1BA8MQ27 555 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 E9PSI1 815 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 GDF11O95390 407 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 CD4P01730 458 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 FCER1AP12319 257 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 SDHBP21912 280 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 SP100P23497 879 aaPredicted RBP5.53□□□□□ -1.52
HERC3-213ENST00000598772 ERVK-21P61565 698 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 BEX3Q00994 111 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 GPM6BQ13491 265 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 SHROOM1Q2M3G4 852 aaPredicted RBP5.53□□□□□ -1.52
HERC3-213ENST00000598772 TIGD5Q53EQ6 642 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 LMBR1LQ6UX01 489 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 CXCL17Q6UXB2 119 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 RETREG2Q8NC44 543 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 FLCNQ8NFG4 579 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 WDR66Q8TBY9 1149 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 HAUS7Q99871 368 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 TINF2Q9BSI4 451 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 PUS3Q9BZE2 481 aaKnown RBP5.53□□□□□ -1.52
HERC3-213ENST00000598772 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 BABAM1Q9NWV8 329 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 CD207Q9UJ71 328 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 DOCK1Q14185 1865 aa5.53□□□□□ -1.52
HERC3-213ENST00000598772 A0A1B0GUL7 405 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 LINC01553A4QN01 128 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 CYSRT1A8MQ03 144 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 STK25O00506 426 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 TBC1D12O60347 775 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 B4GALT4O60513 344 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 IGHA2P01877 340 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 PFKMP08237 780 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 ASNSP08243 561 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 ZNF865P0CJ78 1059 aaPredicted RBP5.52□□□□□ -1.53
HERC3-213ENST00000598772 HOXB1P14653 301 aaPredicted RBP5.52□□□□□ -1.53
HERC3-213ENST00000598772 PRDX5P30044 214 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 LTBRP36941 435 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 NDUFV1P49821 464 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms