RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ANKRD13CQ8N6S4 541 aa25.78■■□□□ 1.72
CHMP2A-204ENST00000597848 GTF3C2Q8WUA4 911 aaPredicted RBP25.78■■□□□ 1.72
CHMP2A-204ENST00000597848 CFHR5Q9BXR6 569 aa25.78■■□□□ 1.72
CHMP2A-204ENST00000597848 UBA5Q9GZZ9 404 aa25.78■■□□□ 1.72
CHMP2A-204ENST00000597848 MAD2L2Q9UI95 211 aa25.78■■□□□ 1.72
CHMP2A-204ENST00000597848 PALM3A6NDB9 673 aaPredicted RBP25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 GOLGA8BA8MQT2 603 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 KLRF2D3W0D1 207 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 DHX16O60231 1041 aaKnown RBP25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 SYDE2Q5VT97 1194 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 BTNL9Q6UXG8 535 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 NOL8Q76FK4 1167 aaKnown RBP25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 FANCBQ8NB91 859 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 MAP3K14Q99558 947 aa25.77■■□□□ 1.72
CHMP2A-204ENST00000597848 GOLGA8AA7E2F4 631 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 ZBED4O75132 1171 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 HSPA1AP0DMV8 641 aaKnown RBP25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 HSPA1BP0DMV9 641 aaKnown RBP25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 CPVLQ9H3G5 476 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 RBPJLQ9UBG7 517 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 PRR12Q9ULL5 1215 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 RABGAP1Q9Y3P9 1069 aa25.76■■□□□ 1.71
CHMP2A-204ENST00000597848 ADGRA2Q96PE1 1338 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 VWA5AO00534 786 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 PEX10O60683 326 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 GNAQP50148 359 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 C17orf99Q6UX52 265 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 LBX2Q6XYB7 198 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 MB21D1Q8N884 522 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 VAT1LQ9HCJ6 419 aa25.75■■□□□ 1.71
CHMP2A-204ENST00000597848 METAP2P50579 478 aaKnown RBP eCLIP25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 EVCP57679 992 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 PLS1Q14651 629 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 RTN1Q16799 776 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 POTEEQ6S8J3 1075 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 GPRC5AQ8NFJ5 357 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 TXNRD2Q9NNW7 524 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 ADAMTS5Q9UNA0 930 aa25.74■■□□□ 1.71
CHMP2A-204ENST00000597848 GPR25O00155 361 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 FDX1P10109 184 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 BCRP11274 1271 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 PDIA3P30101 505 aaKnown RBP25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 RCAN1P53805 252 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 SNAP25P60880 206 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 ZNF274Q96GC6 653 aaPredicted RBP25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 BTBD7Q9P203 1132 aa25.73■■□□□ 1.71
CHMP2A-204ENST00000597848 FOXN1O15353 648 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 ST18O60284 1047 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 STK3Q13188 491 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 FAM110CQ1W6H9 321 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 ADGRF4Q8IZF3 695 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 CPXCR1Q8N123 301 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 LZTS2Q9BRK4 669 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 RBM28Q9NW13 759 aaKnown RBP25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 MORF4L1Q9UBU8 362 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 TPCN1Q9ULQ1 816 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 HPS5Q9UPZ3 1129 aa25.72■■□□□ 1.71
CHMP2A-204ENST00000597848 CNMDO75829 334 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 PLEKHA8P1O95397 391 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 SLC4A3P48751 1232 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 ERVK-9P63128 1117 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 ERVK-24P63145 666 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 CCT2P78371 535 aaKnown RBP25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 SP3Q02447 781 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 TMEM132BQ14DG7 1078 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 CCDC174Q6PII3 467 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 SLC38A10Q9HBR0 1119 aa25.71■■□□□ 1.71
CHMP2A-204ENST00000597848 CCDC196A0A1B0GTZ2 297 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 ECM2O94769 699 aaPredicted RBP25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 PPP2R5BQ15173 497 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 Q3C1V9 767 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 NBPF11Q86T75 865 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 CCAR1Q8IX12 1150 aaKnown RBP25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 CMTR1Q8N1G2 835 aaKnown RBP25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 CCDC82Q8N4S0 544 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 RAVER2Q9HCJ3 691 aaKnown RBP25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 CEP350Q5VT06 3117 aa25.7■■□□□ 1.7
CHMP2A-204ENST00000597848 FKTNO75072 461 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 CDC27P30260 824 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 STAT3P40763 770 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 CTCFP49711 727 aaPredicted RBP25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 CCNA1P78396 465 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 TMTC3Q6ZXV5 915 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 SRBD1Q8N5C6 995 aaKnown RBP25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 IL27Q8NEV9 243 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 REPS2Q8NFH8 660 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 SLKQ9H2G2 1235 aaPredicted RBP25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 RANBP17Q9H2T7 1088 aaKnown RBP25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 JMJD4Q9H9V9 463 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 LIMCH1Q9UPQ0 1083 aa25.69■■□□□ 1.7
CHMP2A-204ENST00000597848 ADD1P35611 737 aaKnown RBP25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 KIF22Q14807 665 aa25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 NOM1Q5C9Z4 860 aaKnown RBP25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 ZNF296Q8WUU4 475 aaPredicted RBP25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 PIBF1Q8WXW3 757 aa25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 SPATC1LQ9H0A9 340 aa25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 RIOX1Q9H6W3 641 aa25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 NCOA5Q9HCD5 579 aaKnown RBP25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 FAM217BQ9NTX9 383 aaPredicted RBP25.68■■□□□ 1.7
CHMP2A-204ENST00000597848 RLFQ13129 1914 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 231.6 ms