RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 HIP1O00291 1037 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 BMP3P12645 472 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 CYBAP13498 195 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
SYMPK-207ENST00000596824 CYP2C19P33261 490 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 COPB2P35606 906 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 HAND2P61296 217 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 TTC22Q5TAA0 569 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 LHX8Q68G74 356 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 TBC1D10CQ8IV04 446 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 TRPV1Q8NER1 839 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 DPF3Q92784 378 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 KIFC2Q96AC6 838 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 MMP19Q99542 508 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 SLC38A10Q9HBR0 1119 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 STX8Q9UNK0 236 aa13.81□□□□□ -0.2
SYMPK-207ENST00000596824 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
SYMPK-207ENST00000596824 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
SYMPK-207ENST00000596824 RASGRP2Q7LDG7 609 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
SYMPK-207ENST00000596824 TMEM232C9JQI7 657 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 ZBED4O75132 1171 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 PGK2P07205 417 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
SYMPK-207ENST00000596824 MCCP23508 829 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 SLC1A4P43007 532 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 KCTD2Q14681 263 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 CPXCR1Q8N123 301 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 IL25Q9H293 177 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 TCP11L1Q9NUJ3 509 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 DDX20Q9UHI6 824 aaKnown RBP13.79□□□□□ -0.2
SYMPK-207ENST00000596824 NEDD4P46934 1319 aa13.79□□□□□ -0.2
SYMPK-207ENST00000596824 CNGA1P29973 690 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 STAT2P52630 851 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 OAZ1P54368 228 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 ZNF792Q3KQV3 632 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 MFSD6Q6ZSS7 791 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
SYMPK-207ENST00000596824 FAM160B2Q86V87 743 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 DSCC1Q9BVC3 393 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 RAVER2Q9HCJ3 691 aaKnown RBP13.78□□□□□ -0.2
SYMPK-207ENST00000596824 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
SYMPK-207ENST00000596824 PFASO15067 1338 aa13.78□□□□□ -0.2
SYMPK-207ENST00000596824 ZNF536O15090 1300 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 MSCO60682 206 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 PLA2G6O60733 806 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 FDX1P10109 184 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 COL6A1P12109 1028 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 KCTD1Q719H9 257 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 CHURC1Q8WUH1 139 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 DCAF4Q8WV16 495 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 TMEM47Q9BQJ4 181 aa13.77□□□□□ -0.21
SYMPK-207ENST00000596824 RNF41Q9H4P4 317 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-207ENST00000596824 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.21
SYMPK-207ENST00000596824 CTDP1Q9Y5B0 961 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-207ENST00000596824 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 RAD50Q92878 1312 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 DNAJC25-GNG10A0A024R161 153 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 ZNF213O14771 459 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 SEPT4O43236 478 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 EVI5O60447 810 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 SLC34A2O95436 690 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
SYMPK-207ENST00000596824 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 TINF2Q9BSI4 451 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
SYMPK-207ENST00000596824 IKQ13123 557 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-207ENST00000596824 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 HABP4Q5JVS0 413 aaKnown RBP13.75□□□□□ -0.21
SYMPK-207ENST00000596824 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 ESR2Q92731 530 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 PRR12Q9ULL5 1215 aa13.75□□□□□ -0.21
SYMPK-207ENST00000596824 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-207ENST00000596824 NT5C2P49902 561 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 C7orf61Q8IZ16 206 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 FGD4Q96M96 766 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 TTC14Q96N46 770 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 ZKSCAN3Q9BRR0 538 aa13.74□□□□□ -0.21
SYMPK-207ENST00000596824 HOMER2Q9NSB8 354 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms