RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ERCC3P19447 782 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 PTPREP23469 700 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 GRK4P32298 578 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 OAZ1P54368 228 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 PLS1Q14651 629 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 PNMA1Q8ND90 353 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 MGAMO43451 1857 aa21.41■■□□□ 1.02
ZNF558-204ENST00000596172 CCDC85CA6NKD9 419 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 ADCY3O60266 1144 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 ZNF543Q08ER8 600 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 SART3Q15020 963 aaKnown RBP21.4■■□□□ 1.02
ZNF558-204ENST00000596172 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
ZNF558-204ENST00000596172 IFIT1BQ5T764 474 aaKnown RBP21.4■■□□□ 1.02
ZNF558-204ENST00000596172 ABRAQ8N0Z2 381 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 KCNB2Q92953 911 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 ZNF333Q96JL9 665 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 CWC22Q9HCG8 908 aaKnown RBP21.4■■□□□ 1.02
ZNF558-204ENST00000596172 IVNS1ABPQ9Y6Y0 642 aa21.4■■□□□ 1.02
ZNF558-204ENST00000596172 IFIT3O14879 490 aaKnown RBP21.39■■□□□ 1.01
ZNF558-204ENST00000596172 GRB14Q14449 540 aa21.39■■□□□ 1.01
ZNF558-204ENST00000596172 CCDC96Q2M329 555 aa21.39■■□□□ 1.01
ZNF558-204ENST00000596172 ISY1Q9ULR0 285 aaKnown RBP21.39■■□□□ 1.01
ZNF558-204ENST00000596172 MTMR7Q9Y216 660 aa21.39■■□□□ 1.01
ZNF558-204ENST00000596172 CTDP1Q9Y5B0 961 aaPredicted RBP21.39■■□□□ 1.01
ZNF558-204ENST00000596172 PARP14Q460N5 1801 aa21.39■■□□□ 1.01
ZNF558-204ENST00000596172 ERICH2A1L162 156 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 ZKSCAN1P17029 563 aaPredicted RBP21.38■■□□□ 1.01
ZNF558-204ENST00000596172 MCM5P33992 734 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 RGS2P41220 211 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 ANTXR2P58335 489 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 IKQ13123 557 aaPredicted RBP21.38■■□□□ 1.01
ZNF558-204ENST00000596172 MAP2K5Q13163 448 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 RASGRP2Q7LDG7 609 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 NCAPG2Q86XI2 1143 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 TRMT44Q8IYL2 757 aaKnown RBP21.38■■□□□ 1.01
ZNF558-204ENST00000596172 IGDCC4Q8TDY8 1250 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 PRR12Q9ULL5 1215 aa21.38■■□□□ 1.01
ZNF558-204ENST00000596172 HOXC6P09630 235 aa21.37■■□□□ 1.01
ZNF558-204ENST00000596172 KRT32Q14532 448 aa21.37■■□□□ 1.01
ZNF558-204ENST00000596172 TTBK2Q6IQ55 1244 aa21.37■■□□□ 1.01
ZNF558-204ENST00000596172 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
ZNF558-204ENST00000596172 CHMP4CQ96CF2 233 aa21.37■■□□□ 1.01
ZNF558-204ENST00000596172 HSPA4P34932 840 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 WTAPQ15007 396 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 ASPRV1Q53RT3 343 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 SYDE2Q5VT97 1194 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 SNRNP48Q6IEG0 339 aaKnown RBP21.36■■□□□ 1.01
ZNF558-204ENST00000596172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.36■■□□□ 1.01
ZNF558-204ENST00000596172 RASEFQ8IZ41 740 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 TMTC2Q8N394 836 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 TMEM87BQ96K49 555 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 APBA2Q99767 749 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 GPCPD1Q9NPB8 672 aa21.36■■□□□ 1.01
ZNF558-204ENST00000596172 FRMPD2Q68DX3 1309 aaPredicted RBP21.35■■□□□ 1.01
ZNF558-204ENST00000596172 PRC1O43663 620 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 FCER1AP12319 257 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 ELNP15502 786 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 CYP2B6P20813 491 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 UBXN2AP68543 259 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 CPXCR1Q8N123 301 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 NEK1Q96PY6 1258 aa21.35■■□□□ 1.01
ZNF558-204ENST00000596172 RANBP17Q9H2T7 1088 aaKnown RBP21.35■■□□□ 1.01
ZNF558-204ENST00000596172 RAVER2Q9HCJ3 691 aaKnown RBP21.35■■□□□ 1.01
ZNF558-204ENST00000596172 CENPFP49454 3210 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 DOCK3Q8IZD9 2030 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 ZNF536O15090 1300 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 WDR19Q8NEZ3 1342 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 ADORA2AP29274 412 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 SLC16A2P36021 539 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 TKFCQ3LXA3 575 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 CHST13Q8NET6 341 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 BIN2Q9UBW5 565 aaPredicted RBP21.34■■□□□ 1.01
ZNF558-204ENST00000596172 FBXO40Q9UH90 709 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 PNMA2Q9UL42 364 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 RIPK3Q9Y572 518 aa21.34■■□□□ 1.01
ZNF558-204ENST00000596172 HMGCRP04035 888 aa21.33■■□□□ 1.01
ZNF558-204ENST00000596172 HMGB1P09429 215 aaKnown RBP21.33■■□□□ 1.01
ZNF558-204ENST00000596172 PARP1P09874 1014 aaKnown RBP21.33■■□□□ 1.01
ZNF558-204ENST00000596172 LIFRP42702 1097 aa21.33■■□□□ 1.01
ZNF558-204ENST00000596172 LY9Q9HBG7 655 aa21.33■■□□□ 1.01
ZNF558-204ENST00000596172 SLC5A4Q9NY91 659 aa21.33■■□□□ 1.01
ZNF558-204ENST00000596172 PLXNB2O15031 1838 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 IGHA2P01877 340 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 INHAP05111 366 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 ICAM1P05362 532 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 GOLGA8HP0CJ92 632 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 EXOSC10Q01780 885 aaKnown RBP21.32■■□□□ 1
ZNF558-204ENST00000596172 TROAPQ12815 778 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 KCTD2Q14681 263 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 DHX32Q7L7V1 743 aaKnown RBP21.32■■□□□ 1
ZNF558-204ENST00000596172 CATIPQ7Z7H3 387 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 DPP9Q86TI2 863 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 TRIB2Q92519 343 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 AGBL1Q96MI9 1066 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 MMP19Q99542 508 aa21.32■■□□□ 1
ZNF558-204ENST00000596172 MAP3K14Q99558 947 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms