RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SLC16A2P36021 539 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
DDX49-204ENST00000595858 RABEP1Q15276 862 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 MICU3Q86XE3 530 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 RAB11FIP4Q86YS3 637 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 KIFC2Q96AC6 838 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 LARP6Q9BRS8 491 aaKnown RBP17.44■□□□□ 0.38
DDX49-204ENST00000595858 CPA4Q9UI42 421 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 AK2P54819 239 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 CTCFLQ8NI51 663 aaPredicted RBP17.44■□□□□ 0.38
DDX49-204ENST00000595858 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
DDX49-204ENST00000595858 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 RBPJLQ9UBG7 517 aa17.44■□□□□ 0.38
DDX49-204ENST00000595858 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
DDX49-204ENST00000595858 RLFQ13129 1914 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 KLRF2D3W0D1 207 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 VWA5AO00534 786 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 ANKRD1Q15327 319 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 TXNRD2Q9NNW7 524 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
DDX49-204ENST00000595858 PEX10O60683 326 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 BCRP11274 1271 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 PDIA3P30101 505 aaKnown RBP17.42■□□□□ 0.38
DDX49-204ENST00000595858 KIF5BP33176 963 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 RCAN1P53805 252 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 CPVLQ9H3G5 476 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 RABGAP1Q9Y3P9 1069 aa17.42■□□□□ 0.38
DDX49-204ENST00000595858 GOLGA8BA8MQT2 603 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 HSPA1AP0DMV8 641 aaKnown RBP17.41■□□□□ 0.38
DDX49-204ENST00000595858 HSPA1BP0DMV9 641 aaKnown RBP17.41■□□□□ 0.38
DDX49-204ENST00000595858 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
DDX49-204ENST00000595858 PAGR1Q9BTK6 254 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 BTBD7Q9P203 1132 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 HPS5Q9UPZ3 1129 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 GPR25O00155 361 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 CNMDO75829 334 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 FDX1P10109 184 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 Q3C1V9 767 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 FAM217BQ9NTX9 383 aaPredicted RBP17.41■□□□□ 0.38
DDX49-204ENST00000595858 MORF4L1Q9UBU8 362 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 TPCN1Q9ULQ1 816 aa17.41■□□□□ 0.38
DDX49-204ENST00000595858 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 GOLGA8AA7E2F4 631 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 ZBED4O75132 1171 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 GNAQP50148 359 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDX49-204ENST00000595858 TMEM132BQ14DG7 1078 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 RTN1Q16799 776 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
DDX49-204ENST00000595858 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 IL27Q8NEV9 243 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
DDX49-204ENST00000595858 FOXN1O15353 648 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 CDC27P30260 824 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 SNAP25P60880 206 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 ERVK-9P63128 1117 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 ERVK-24P63145 666 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 PPP2R5BQ15173 497 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 SLC35G1Q2M3R5 365 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.38
DDX49-204ENST00000595858 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 VAT1LQ9HCJ6 419 aa17.39■□□□□ 0.38
DDX49-204ENST00000595858 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.38
DDX49-204ENST00000595858 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.38
DDX49-204ENST00000595858 PLEKHA8P1O95397 391 aa17.39■□□□□ 0.37
DDX49-204ENST00000595858 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
DDX49-204ENST00000595858 SRBD1Q8N5C6 995 aaKnown RBP17.39■□□□□ 0.37
DDX49-204ENST00000595858 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
DDX49-204ENST00000595858 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
DDX49-204ENST00000595858 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
DDX49-204ENST00000595858 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 CYTH3O43739 400 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 DHX16O60231 1041 aaKnown RBP17.38■□□□□ 0.37
DDX49-204ENST00000595858 ST18O60284 1047 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
DDX49-204ENST00000595858 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
DDX49-204ENST00000595858 SP3Q02447 781 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 CPXCR1Q8N123 301 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 CMTR1Q8N1G2 835 aaKnown RBP17.38■□□□□ 0.37
DDX49-204ENST00000595858 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 ZNF214Q9UL59 606 aaPredicted RBP17.38■□□□□ 0.37
DDX49-204ENST00000595858 NID2Q14112 1375 aa17.38■□□□□ 0.37
DDX49-204ENST00000595858 ATP2A1O14983 1001 aa17.37■□□□□ 0.37
DDX49-204ENST00000595858 STK3Q13188 491 aa17.37■□□□□ 0.37
DDX49-204ENST00000595858 PLS1Q14651 629 aa17.37■□□□□ 0.37
DDX49-204ENST00000595858 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
DDX49-204ENST00000595858 RAVER2Q9HCJ3 691 aaKnown RBP17.37■□□□□ 0.37
DDX49-204ENST00000595858 LIMCH1Q9UPQ0 1083 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms