RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CALML3P27482 149 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 ZNF713Q8N859 430 aaPredicted RBP23.93■■□□□ 1.42
PNKP-203ENST00000593946 CCDC148Q8NFR7 591 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 SPATA32Q96LK8 384 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 FTOQ9C0B1 505 aaKnown RBP eCLIP23.93■■□□□ 1.42
PNKP-203ENST00000593946 BRMS1Q9HCU9 246 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 ISY1Q9ULR0 285 aaKnown RBP23.93■■□□□ 1.42
PNKP-203ENST00000593946 NLRP5P59047 1200 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 BTNL9Q6UXG8 535 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 SPICE1Q8N0Z3 855 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 FZD1Q9UP38 647 aa23.93■■□□□ 1.42
PNKP-203ENST00000593946 DDX49Q9Y6V7 483 aaKnown RBP23.93■■□□□ 1.42
PNKP-203ENST00000593946 PNMA6FA0A0J9YX94 578 aa23.92■■□□□ 1.42
PNKP-203ENST00000593946 GADD45BO75293 160 aaPredicted RBP23.92■■□□□ 1.42
PNKP-203ENST00000593946 KLHL40Q2TBA0 621 aa23.92■■□□□ 1.42
PNKP-203ENST00000593946 TNFRSF25Q93038 417 aa23.92■■□□□ 1.42
PNKP-203ENST00000593946 POLR3EQ9NVU0 708 aa23.92■■□□□ 1.42
PNKP-203ENST00000593946 RTEL1Q9NZ71 1219 aa23.92■■□□□ 1.42
PNKP-203ENST00000593946 USP17L10C9JJH3 530 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 GALNT17Q6IS24 598 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 DLK2Q6UY11 383 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 PNMA8AQ86V59 439 aaPredicted RBP23.91■■□□□ 1.42
PNKP-203ENST00000593946 DAGLBQ8NCG7 672 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 GPT2Q8TD30 523 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 CCDC12Q8WUD4 166 aaPredicted RBP23.91■■□□□ 1.42
PNKP-203ENST00000593946 ZKSCAN4Q969J2 545 aaPredicted RBP23.91■■□□□ 1.42
PNKP-203ENST00000593946 KIAA1683Q9H0B3 1180 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 RCOR1Q9UKL0 485 aa23.91■■□□□ 1.42
PNKP-203ENST00000593946 TMEM232C9JQI7 657 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 ZBTB5O15062 677 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 UBE2HP62256 183 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 CEBPZQ03701 1054 aaKnown RBP23.9■■□□□ 1.42
PNKP-203ENST00000593946 NOL9Q5SY16 702 aaKnown RBP23.9■■□□□ 1.42
PNKP-203ENST00000593946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.9■■□□□ 1.423e-6■■■■■ 38.3
PNKP-203ENST00000593946 FEZ1Q99689 392 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 ZMYND12Q9H0C1 365 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 PCDHA4Q9UN74 947 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 USP2O75604 605 aaPredicted RBP23.9■■□□□ 1.42
PNKP-203ENST00000593946 PTPRAP18433 802 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 NASPP49321 788 aaPredicted RBP23.9■■□□□ 1.42
PNKP-203ENST00000593946 NAPAP54920 295 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 ZYXQ15942 572 aaKnown RBP23.9■■□□□ 1.42
PNKP-203ENST00000593946 PICK1Q9NRD5 415 aa23.9■■□□□ 1.42
PNKP-203ENST00000593946 MBD3O95983 291 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
PNKP-203ENST00000593946 FAM83BQ5T0W9 1011 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 SYDE2Q5VT97 1194 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 BLIDQ8IZY5 108 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 WDR18Q9BV38 432 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 CLIC4Q9Y696 253 aa23.89■■□□□ 1.41
PNKP-203ENST00000593946 ESYT2A0FGR8 921 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 M0R2N6 131 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 ADAMTS3O15072 1205 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 PPP1R11O60927 126 aaPredicted RBP23.88■■□□□ 1.41
PNKP-203ENST00000593946 YEATS4O95619 227 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 STAT2P52630 851 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 ANO1Q5XXA6 986 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 PARP14Q460N5 1801 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 PTPRFP10586 1907 aa23.88■■□□□ 1.41
PNKP-203ENST00000593946 PLA2G6O60733 806 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 TOB1P50616 345 aaPredicted RBP23.87■■□□□ 1.41
PNKP-203ENST00000593946 RILPL1Q5EBL4 403 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 PPP1R18Q6NYC8 613 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 LINC00301Q8NCQ3 95 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 LPAR1Q92633 364 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 CDCA5Q96FF9 252 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 IKQ13123 557 aaPredicted RBP23.87■■□□□ 1.41
PNKP-203ENST00000593946 CDC37Q16543 378 aaPredicted RBP23.87■■□□□ 1.41
PNKP-203ENST00000593946 QRICH1Q2TAL8 776 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 EARS2Q5JPH6 523 aaKnown RBP23.87■■□□□ 1.41
PNKP-203ENST00000593946 AS3MTQ9HBK9 375 aa23.87■■□□□ 1.41
PNKP-203ENST00000593946 PPP1R12BO60237 982 aaPredicted RBP23.86■■□□□ 1.41
PNKP-203ENST00000593946 PRKG1Q13976 671 aa23.86■■□□□ 1.41
PNKP-203ENST00000593946 COA7Q96BR5 231 aa23.86■■□□□ 1.41
PNKP-203ENST00000593946 PRR12Q9ULL5 1215 aa23.86■■□□□ 1.41
PNKP-203ENST00000593946 SMCHD1A6NHR9 2005 aa23.86■■□□□ 1.41
PNKP-203ENST00000593946 FAM205CA6NFA0 338 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 SMCO2A6NFE2 343 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 GNA11P29992 359 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.85■■□□□ 1.41
PNKP-203ENST00000593946 ZNF280CQ8ND82 737 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 CHURC1Q8WUH1 139 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 PGBD1Q96JS3 809 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 C6orf50Q9HD87 102 aa23.85■■□□□ 1.41
PNKP-203ENST00000593946 WDR46O15213 610 aaKnown RBP23.84■■□□□ 1.41
PNKP-203ENST00000593946 USP14P54578 494 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 SPP2Q13103 211 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 MTMR2Q13614 643 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 STK38Q15208 465 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 SF3A1Q15459 793 aaKnown RBP23.84■■□□□ 1.41
PNKP-203ENST00000593946 NOM1Q5C9Z4 860 aaKnown RBP23.84■■□□□ 1.41
PNKP-203ENST00000593946 KCNG4Q8TDN1 519 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 NF2P35240 595 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 BACE1P56817 501 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 MAP3K9P80192 1104 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 SLC39A14Q15043 492 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 PTPAQ15257 358 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 FAM160B2Q86V87 743 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 FEM1BQ9UK73 627 aa23.84■■□□□ 1.41
PNKP-203ENST00000593946 SNCAIPQ9Y6H5 919 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms