RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 SH3GLB2Q9NR46 395 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 hCG_1984214I3L0E3 225 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 RAD21O60216 631 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 PLA2G6O60733 806 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 USP14P54578 494 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 KIF23Q02241 960 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 PRKG1Q13976 671 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 VGLL4Q14135 290 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 ADGRF4Q8IZF3 695 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 ZNF713Q8N859 430 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 CAPNS2Q96L46 248 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 PIGSQ96S52 555 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 FEZ1Q99689 392 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
CACNA1A-213ENST00000593267 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 STXBP3O00186 592 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 SLC16A2P36021 539 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 BACE1P56817 501 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 FMR1Q06787 632 aaKnown RBP eCLIP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 MTMR2Q13614 643 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 ABHD8Q96I13 439 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 C12orf42Q96LP6 360 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 SEC63Q9UGP8 760 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 CSADQ9Y600 493 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 TCHHQ07283 1943 aa13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 BAZ2BQ9UIF8 2168 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-213ENST00000593267 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 PNMA6FA0A0J9YX94 578 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 TMEM232C9JQI7 657 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 TRAF5O00463 557 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 ZBTB5O15062 677 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 STAT2P52630 851 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 SPP2Q13103 211 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 NPY5RQ15761 445 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 HOMER1Q86YM7 354 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 CCDC148Q8NFR7 591 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 KCNJ14Q9UNX9 436 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 RLFQ13129 1914 aa13.29□□□□□ -0.28
CACNA1A-213ENST00000593267 UNCXA6NJT0 531 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 C19orf81C9J6K1 198 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 MCM4P33991 863 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 HEATR3Q7Z4Q2 680 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 DIS3L2Q8IYB7 885 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-213ENST00000593267 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 BTBD18B2RXH4 712 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 VCAM1P19320 739 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 CALML3P27482 149 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 KRT2P35908 639 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 FKBP1BP68106 108 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 PPATQ06203 517 aa13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-213ENST00000593267 CST9Q5W186 159 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms