RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 PLA2G5P39877 138 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 ABL2P42684 1182 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 BTDP43251 543 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 PHKA1P46020 1223 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 NR1H3Q13133 447 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBD1-215ENST00000593110 PICALMQ13492 652 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-215ENST00000593110 APBA2Q99767 749 aa11.82□□□□□ -0.52
TUBD1-215ENST00000593110 AVPP01185 164 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 FSHRP23945 695 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 HOXA7P31268 230 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-215ENST00000593110 CAP2P40123 477 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 RTP1P59025 263 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 HERVK_113P62684 666 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 NR5A1Q13285 461 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 NNTQ13423 1086 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 GPR142Q7Z601 462 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 HPS1Q92902 700 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
TUBD1-215ENST00000593110 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-215ENST00000593110 SENP6Q9GZR1 1112 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-215ENST00000593110 FLRT1Q9NZU1 646 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
TUBD1-215ENST00000593110 PDS5AQ29RF7 1337 aaKnown RBP11.81□□□□□ -0.52
TUBD1-215ENST00000593110 TMEM265A0A087WTH1 108 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 RAD21O60216 631 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 MAPK4P31152 587 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 JAG1P78504 1218 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 SNX17Q15036 470 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 WDR18Q9BV38 432 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.8□□□□□ -0.52
TUBD1-215ENST00000593110 DENND2AQ9ULE3 1009 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
TUBD1-215ENST00000593110 CHD7Q9P2D1 2997 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 XIRP2A4UGR9 3374 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 GPR75-ASB3A0A0A6YYF3 556 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 DNM1LO00429 736 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 RGS2P41220 211 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 ERVK-24P63145 666 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-215ENST00000593110 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-215ENST00000593110 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 DNAJC18Q9H819 358 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 DDX20Q9UHI6 824 aaKnown RBP11.79□□□□□ -0.52
TUBD1-215ENST00000593110 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 REV3LO60673 3130 aa11.79□□□□□ -0.52
TUBD1-215ENST00000593110 CNMDO75829 334 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 NEFLP07196 543 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 ADORA1P30542 326 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 GRM5P41594 1212 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 BACE1P56817 501 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 PLEKHH3Q7Z736 793 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 TRPV1Q8NER1 839 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 ZNF592Q92610 1267 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 LPAR1Q92633 364 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 BADQ92934 168 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
TUBD1-215ENST00000593110 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
TUBD1-215ENST00000593110 AXIN1O15169 862 aa11.77□□□□□ -0.53
TUBD1-215ENST00000593110 CYBAP13498 195 aa11.77□□□□□ -0.53
TUBD1-215ENST00000593110 CCDC102BQ68D86 513 aa11.77□□□□□ -0.53
TUBD1-215ENST00000593110 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
TUBD1-215ENST00000593110 ZGPATQ8N5A5 531 aaKnown RBP11.77□□□□□ -0.53
TUBD1-215ENST00000593110 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.53
TUBD1-215ENST00000593110 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
TUBD1-215ENST00000593110 CIAO1O76071 339 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 HOXC6P09630 235 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 ITGB8P26012 769 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 EPHB4P54760 987 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 MECOMQ03112 1051 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 SLC39A5Q6ZMH5 540 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 METTL16Q86W50 562 aaKnown RBP11.76□□□□□ -0.53
TUBD1-215ENST00000593110 AS3MTQ9HBK9 375 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
TUBD1-215ENST00000593110 PRKAG2Q9UGJ0 569 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 ATP11BQ9Y2G3 1177 aa11.76□□□□□ -0.53
TUBD1-215ENST00000593110 PIEZO1Q92508 2521 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 MSCO60682 206 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-215ENST00000593110 GRB14Q14449 540 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 TRIM60Q495X7 471 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
TUBD1-215ENST00000593110 CRIPAKQ8N1N5 446 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms