RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 BMP3P12645 472 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 MFAP1P55081 439 aaKnown RBP16.43■□□□□ 0.22
APOC1-208ENST00000592535 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
APOC1-208ENST00000592535 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 TRPV1Q8NER1 839 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 SLC5A4Q9NY91 659 aa16.43■□□□□ 0.22
APOC1-208ENST00000592535 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
APOC1-208ENST00000592535 HIP1O00291 1037 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 ZBED4O75132 1171 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 PGK2P07205 417 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 CYBAP13498 195 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
APOC1-208ENST00000592535 CNGA1P29973 690 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 COPB2P35606 906 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 KCTD2Q14681 263 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
APOC1-208ENST00000592535 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 GMCL1Q96IK5 515 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 MAML3Q96JK9 1138 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 RAVER2Q9HCJ3 691 aaKnown RBP16.42■□□□□ 0.22
APOC1-208ENST00000592535 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
APOC1-208ENST00000592535 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 ATP2A1O14983 1001 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 MCCP23508 829 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 SLC1A4P43007 532 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 NOVP48745 357 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 C11orf49Q9H6J7 331 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 DDX20Q9UHI6 824 aaKnown RBP16.41■□□□□ 0.22
APOC1-208ENST00000592535 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
APOC1-208ENST00000592535 CEP290O15078 2479 aa16.41■□□□□ 0.22
APOC1-208ENST00000592535 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 STAT2P52630 851 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
APOC1-208ENST00000592535 EVI5O60447 810 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 MSCO60682 206 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
APOC1-208ENST00000592535 RCSD1Q6JBY9 416 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 MFSD6Q6ZSS7 791 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 IL25Q9H293 177 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 TCP11L1Q9NUJ3 509 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 COLQQ9Y215 455 aaPredicted RBP16.39■□□□□ 0.21
APOC1-208ENST00000592535 NR2E3Q9Y5X4 410 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 PFASO15067 1338 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 NEDD4P46934 1319 aa16.39■□□□□ 0.21
APOC1-208ENST00000592535 MCM3APO60318 1980 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 ZNF213O14771 459 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 PCP11498 1178 aaKnown RBP16.38■□□□□ 0.21
APOC1-208ENST00000592535 COL6A1P12109 1028 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 OAZ1P54368 228 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 HABP4Q5JVS0 413 aaKnown RBP16.38■□□□□ 0.21
APOC1-208ENST00000592535 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 DSCC1Q9BVC3 393 aa16.38■□□□□ 0.21
APOC1-208ENST00000592535 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
APOC1-208ENST00000592535 SEPT4O43236 478 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 PLA2G6O60733 806 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 SLC34A2O95436 690 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 FDX1P10109 184 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
APOC1-208ENST00000592535 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 DCAF4Q8WV16 495 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 TINF2Q9BSI4 451 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
APOC1-208ENST00000592535 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 ZNF536O15090 1300 aa16.37■□□□□ 0.21
APOC1-208ENST00000592535 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 SNAP25P60880 206 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.36■□□□□ 0.21
APOC1-208ENST00000592535 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 ESR2Q92731 530 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 AGBL1Q96MI9 1066 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
APOC1-208ENST00000592535 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
APOC1-208ENST00000592535 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
APOC1-208ENST00000592535 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
APOC1-208ENST00000592535 ZKSCAN3Q9BRR0 538 aa16.35■□□□□ 0.21
APOC1-208ENST00000592535 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
APOC1-208ENST00000592535 FRMPD2Q68DX3 1309 aaPredicted RBP16.35■□□□□ 0.21
APOC1-208ENST00000592535 DNM1LO00429 736 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 PDHBP11177 359 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 SLC16A2P36021 539 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 IMMTQ16891 758 aaKnown RBP16.34■□□□□ 0.21
APOC1-208ENST00000592535 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms