RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 KCNJ6P48051 423 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 PICALMQ13492 652 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 CUL4BQ13620 913 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 ZNF772Q68DY9 489 aaPredicted RBP17.9■□□□□ 0.46
MBD1-227ENST00000592060 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 NYAP1Q6ZVC0 841 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 IQUBQ8NA54 791 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 TTF2Q9UNY4 1162 aaKnown RBP17.9■□□□□ 0.46
MBD1-227ENST00000592060 TNNT1P13805 278 aa17.89■□□□□ 0.45
MBD1-227ENST00000592060 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.45
MBD1-227ENST00000592060 DOK7Q18PE1 504 aa17.89■□□□□ 0.45
MBD1-227ENST00000592060 CCAR2Q8N163 923 aaKnown RBP17.89■□□□□ 0.45
MBD1-227ENST00000592060 MYO3BQ8WXR4 1341 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
MBD1-227ENST00000592060 APBA3O96018 575 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 INF2Q27J81 1249 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 MTRQ99707 1265 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 TMEM60Q9H2L4 133 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 MTMR4Q9NYA4 1195 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 AKR1B1P15121 316 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 HHIPL2Q6UWX4 724 aa17.88■□□□□ 0.45
MBD1-227ENST00000592060 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
MBD1-227ENST00000592060 SCN9AQ15858 1988 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 GTPBP6O43824 516 aaPredicted RBP17.87■□□□□ 0.45
MBD1-227ENST00000592060 PDHBP11177 359 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 NAPAP54920 295 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 CCDC12Q8WUD4 166 aaPredicted RBP17.87■□□□□ 0.45
MBD1-227ENST00000592060 RIOX1Q9H6W3 641 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 MYH4Q9Y623 1939 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 SYNRGQ9UMZ2 1314 aa17.87■□□□□ 0.45
MBD1-227ENST00000592060 PPP1R3GB7ZBB8 358 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SNHG28P0DPA3 235 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SCNN1DP51172 638 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
MBD1-227ENST00000592060 HSP90AA4PQ58FG1 418 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 E4F1Q66K89 784 aaPredicted RBP17.86■□□□□ 0.45
MBD1-227ENST00000592060 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 KRT25Q7Z3Z0 450 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SAMSN1Q9NSI8 373 aaKnown RBP17.86■□□□□ 0.45
MBD1-227ENST00000592060 SWAP70Q9UH65 585 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 ESYT2A0FGR8 921 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 LAD1O00515 517 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 PRPHP41219 470 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SPATA1Q5VX52 437 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 APOBEC3HQ6NTF7 200 aaKnown RBP17.86■□□□□ 0.45
MBD1-227ENST00000592060 STAMQ92783 540 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 PIGSQ96S52 555 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
MBD1-227ENST00000592060 SHMT1P34896 483 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 TXLNAP40222 546 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 ASPRV1Q53RT3 343 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 APTXQ7Z2E3 356 aaKnown RBP17.85■□□□□ 0.45
MBD1-227ENST00000592060 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 C6orf50Q9HD87 102 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 DISC1Q9NRI5 854 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
MBD1-227ENST00000592060 SERPINB13Q9UIV8 391 aa17.85■□□□□ 0.45
MBD1-227ENST00000592060 PSDA5PKW4 1024 aaPredicted RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 SMCO2A6NFE2 343 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 hCG_1984214I3L0E3 225 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 RXRBP28702 533 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CDKAL1Q5VV42 579 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 SMYD4Q8IYR2 804 aaPredicted RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 LRRC47Q8N1G4 583 aaKnown RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 ZNF713Q8N859 430 aaPredicted RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 BLZF1Q9H2G9 400 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 TRMT1Q9NXH9 659 aaKnown RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 RRP9O43818 475 aaKnown RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 GNA11P29992 359 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CDC25AP30304 524 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 RBM10P98175 930 aaKnown RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
MBD1-227ENST00000592060 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.45
MBD1-227ENST00000592060 PTPN21Q16825 1174 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 NAALADL2Q58DX5 795 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CCDC112Q8NEF3 446 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 CCSER1Q9C0I3 900 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 UBA5Q9GZZ9 404 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 PAXBP1Q9Y5B6 917 aa17.84■□□□□ 0.45
MBD1-227ENST00000592060 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.45
MBD1-227ENST00000592060 A0A1B0GTH6 734 aa17.83■□□□□ 0.44
MBD1-227ENST00000592060 CTIFO43310 598 aaKnown RBP17.83■□□□□ 0.44
MBD1-227ENST00000592060 NRDCO43847 1150 aa17.83■□□□□ 0.44
MBD1-227ENST00000592060 CDK11BP21127 795 aaKnown RBP17.83■□□□□ 0.44
MBD1-227ENST00000592060 PTPN14Q15678 1187 aa17.83■□□□□ 0.44
MBD1-227ENST00000592060 KLHL10Q6JEL2 608 aa17.83■□□□□ 0.44
MBD1-227ENST00000592060 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
MBD1-227ENST00000592060 TSC1Q92574 1164 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms