RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 TRAF1Q13077 416 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS25-206ENST00000591584 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
VPS25-206ENST00000591584 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
VPS25-206ENST00000591584 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 GTPBP4Q9BZE4 634 aaKnown RBP11.82□□□□□ -0.52
VPS25-206ENST00000591584 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
VPS25-206ENST00000591584 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
VPS25-206ENST00000591584 CBFA2T2O43439 604 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 SH3RF1Q7Z6J0 888 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
VPS25-206ENST00000591584 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 SPATA20Q8TB22 786 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 MAGEF1Q9HAY2 307 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 PCDHA5Q9Y5H7 936 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 MYH6P13533 1939 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
VPS25-206ENST00000591584 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 ZBTB5O15062 677 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 TBC1D12O60347 775 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 DPEP1P16444 411 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 KCNA3P22001 575 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 MCM7P33993 719 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 DLGAP5Q15398 846 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 DPCR1Q3MIW9 517 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 FAM151AQ8WW52 585 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
VPS25-206ENST00000591584 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 PIGSQ96S52 555 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 GMLQ99445 158 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 CUEDC2Q9H467 287 aa11.8□□□□□ -0.52
VPS25-206ENST00000591584 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
VPS25-206ENST00000591584 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 AP5Z1O43299 807 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 VEGFAP15692 232 aaPredicted RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 ADCY7P51828 1080 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 GSDMDP57764 484 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 MYL5Q02045 173 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 PNOCQ13519 176 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 MORC3Q14149 939 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
VPS25-206ENST00000591584 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 PAGE5Q96GU1 130 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 VAT1LQ9HCJ6 419 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 RMND1Q9NWS8 449 aa11.79□□□□□ -0.52
VPS25-206ENST00000591584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS25-206ENST00000591584 SLC26A4O43511 780 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 SLC1A4P43007 532 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 GRIN1Q05586 938 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 TCP10Q12799 353 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 TNIP1Q15025 636 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 ADGRF4Q8IZF3 695 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 LRRC47Q8N1G4 583 aaKnown RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 PRMT6Q96LA8 375 aaPredicted RBP11.78□□□□□ -0.52
VPS25-206ENST00000591584 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
VPS25-206ENST00000591584 TDRD3Q9H7E2 651 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms