RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TXNRD2Q9NNW7 524 aa25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 RALYLQ86SE5 291 aaKnown RBP25.24■■□□□ 1.63
R3HDM4-206ENST00000590454 CHMP4CQ96CF2 233 aa25.24■■□□□ 1.63
R3HDM4-206ENST00000590454 C12orf42Q96LP6 360 aa25.24■■□□□ 1.63
R3HDM4-206ENST00000590454 ZSCAN10Q96SZ4 725 aaPredicted RBP25.24■■□□□ 1.63
R3HDM4-206ENST00000590454 VCPKMTQ9H867 229 aa25.24■■□□□ 1.63
R3HDM4-206ENST00000590454 EPB41L2O43491 1005 aaKnown RBP25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 PEX10O60683 326 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 VCAM1P19320 739 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 RGS2P41220 211 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 USP14P54578 494 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 MDM2Q00987 491 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 LRRC26Q2I0M4 334 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 LHX8Q68G74 356 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 RASGRP2Q7LDG7 609 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 USP6NLQ92738 828 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 RBPJLQ9UBG7 517 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 PLXNB2O15031 1838 aa25.23■■□□□ 1.63
R3HDM4-206ENST00000590454 TNKSO95271 1327 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 RAD21O60216 631 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 CCND3P30281 292 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 Q3C1V9 767 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 FAM109BQ6ICB4 259 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 ENAHQ8N8S7 591 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 GTF3C2Q8WUA4 911 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 TMEM47Q9BQJ4 181 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 COL25A1Q9BXS0 654 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 SH2D4AQ9H788 454 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 SENP2Q9HC62 589 aa25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 GPHNQ9NQX3 736 aaPredicted RBP25.22■■□□□ 1.63
R3HDM4-206ENST00000590454 A0A0C4DFX4 3053 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 F5H6K3 240 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 CPA1P15085 419 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 ERVK-9P63128 1117 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 ERVK-24P63145 666 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 KLRC3Q07444 240 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 GPR142Q7Z601 462 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 IQCA1Q86XH1 822 aa25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 NUP88Q99567 741 aaPredicted RBP25.21■■□□□ 1.63
R3HDM4-206ENST00000590454 POTEB2H3BUK9 544 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 NDUFB10O96000 172 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 NT5C2P49902 561 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 SEC23AQ15436 765 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 MORN1Q5T089 497 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 PLEKHH3Q7Z736 793 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 NEK1Q96PY6 1258 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 UBAC1Q9BSL1 405 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 RPAP3Q9H6T3 665 aaPredicted RBP25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 GOPCQ9HD26 462 aa25.2■■□□□ 1.62
R3HDM4-206ENST00000590454 PRC1O43663 620 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 TOP1P11387 765 aaKnown RBP25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 CCL14Q16627 93 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 IGDCC4Q8TDY8 1250 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 ANKS1AQ92625 1134 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 TCEANC2Q96MN5 208 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 JAKMIP1Q96N16 626 aaKnown RBP25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 APBA2Q99767 749 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 LRRC2Q9BYS8 371 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 PORCNQ9H237 461 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 MTMR7Q9Y216 660 aa25.19■■□□□ 1.62
R3HDM4-206ENST00000590454 IFIT3O14879 490 aaKnown RBP25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 KRT32Q14532 448 aa25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 DGKHQ86XP1 1220 aa25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 GMCL1P1Q8NEA9 526 aa25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 TTC14Q96N46 770 aa25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 LBHD1Q9BQE6 289 aaPredicted RBP25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 PAGR1Q9BTK6 254 aa25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 CWC22Q9HCG8 908 aaKnown RBP25.18■■□□□ 1.62
R3HDM4-206ENST00000590454 MCM5P33992 734 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 EXOSC10Q01780 885 aaKnown RBP25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 PPP4R3BQ5MIZ7 849 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 FAM83BQ5T0W9 1011 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 SLFN13Q68D06 897 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 CATSPERGQ6ZRH7 1159 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 LPAR1Q92633 364 aa25.17■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L15C9J2P7 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L13C9JLJ4 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L11C9JVI0 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L18D6R9N7 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L22D6RA61 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L17D6RBQ6 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L19D6RCP7 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L20D6RJB6 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 MCCP23508 829 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 USP17L24Q0WX57 530 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 POTEEQ6S8J3 1075 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 GUCD1Q96NT3 240 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 SENP6Q9GZR1 1112 aaPredicted RBP25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 SYNPO2Q9UMS6 1093 aa25.16■■□□□ 1.62
R3HDM4-206ENST00000590454 WDR46O15213 610 aaKnown RBP25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 MAP2K5Q13163 448 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 CCDC178Q5BJE1 867 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 TMEM67Q5HYA8 995 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 MFSD14CQ5VZR4 134 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 TANGO6Q9C0B7 1094 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 LY9Q9HBG7 655 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 FBXO28Q9NVF7 368 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 RLFQ13129 1914 aa25.15■■□□□ 1.62
R3HDM4-206ENST00000590454 SH2B2O14492 632 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms