RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 HMX1Q9NP08 348 aaPredicted RBP25.25■■□□□ 1.63
LRP3-202ENST00000590275 FEM1BQ9UK73 627 aa25.25■■□□□ 1.63
LRP3-202ENST00000590275 MTMR7Q9Y216 660 aa25.25■■□□□ 1.63
LRP3-202ENST00000590275 TAF6LQ9Y6J9 622 aa25.25■■□□□ 1.63
LRP3-202ENST00000590275 STRNO43815 780 aa25.24■■□□□ 1.63
LRP3-202ENST00000590275 SNAP25P60880 206 aa25.24■■□□□ 1.63
LRP3-202ENST00000590275 DIS3LQ8TF46 1054 aaKnown RBP25.24■■□□□ 1.63
LRP3-202ENST00000590275 ZNF236Q9UL36 1845 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 SLC25A27O95847 323 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 TFRCP02786 760 aaKnown RBP25.23■■□□□ 1.63
LRP3-202ENST00000590275 PGK2P07205 417 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 TAL1P17542 331 aaPredicted RBP25.23■■□□□ 1.63
LRP3-202ENST00000590275 LHX8Q68G74 356 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 TTBK2Q6IQ55 1244 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 TRMT44Q8IYL2 757 aaKnown RBP25.23■■□□□ 1.63
LRP3-202ENST00000590275 CPXCR1Q8N123 301 aa25.23■■□□□ 1.63
LRP3-202ENST00000590275 ZNF536O15090 1300 aa25.22■■□□□ 1.63
LRP3-202ENST00000590275 ATP2A1O14983 1001 aa25.22■■□□□ 1.63
LRP3-202ENST00000590275 SLC1A4P43007 532 aa25.22■■□□□ 1.63
LRP3-202ENST00000590275 SNRNP48Q6IEG0 339 aaKnown RBP25.22■■□□□ 1.63
LRP3-202ENST00000590275 DPP9Q86TI2 863 aa25.22■■□□□ 1.63
LRP3-202ENST00000590275 ABRAQ8N0Z2 381 aa25.22■■□□□ 1.63
LRP3-202ENST00000590275 PDE4DIPQ5VU43 2346 aa25.21■■□□□ 1.63
LRP3-202ENST00000590275 B4E1Z4 1266 aa25.21■■□□□ 1.63
LRP3-202ENST00000590275 SGSM2O43147 1006 aa25.21■■□□□ 1.63
LRP3-202ENST00000590275 FARP2O94887 1054 aaPredicted RBP25.21■■□□□ 1.63
LRP3-202ENST00000590275 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
LRP3-202ENST00000590275 MMP19Q99542 508 aa25.21■■□□□ 1.63
LRP3-202ENST00000590275 TEX13BQ9BXU2 312 aa25.21■■□□□ 1.63
LRP3-202ENST00000590275 RAD50Q92878 1312 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 KDM4AO75164 1064 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 TOP1P11387 765 aaKnown RBP25.2■■□□□ 1.62
LRP3-202ENST00000590275 PCP11498 1178 aaKnown RBP25.2■■□□□ 1.62
LRP3-202ENST00000590275 FCER1AP12319 257 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 ZNF792Q3KQV3 632 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 PRAMEF19Q5SWL8 479 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 MAML3Q96JK9 1138 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 OGDHLQ9ULD0 1010 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 LAMA4Q16363 1823 aa25.2■■□□□ 1.62
LRP3-202ENST00000590275 ZBED4O75132 1171 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 SLC16A2P36021 539 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 SLC4A3P48751 1232 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 STAT2P52630 851 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 OLFML2BQ68BL8 750 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 AGBL1Q96MI9 1066 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 RNF41Q9H4P4 317 aaPredicted RBP25.19■■□□□ 1.62
LRP3-202ENST00000590275 ZSWIM5Q9P217 1185 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 PRR12Q9ULL5 1215 aa25.19■■□□□ 1.62
LRP3-202ENST00000590275 ISY1Q9ULR0 285 aaKnown RBP25.19■■□□□ 1.62
LRP3-202ENST00000590275 FRMPD2Q68DX3 1309 aaPredicted RBP25.18■■□□□ 1.62
LRP3-202ENST00000590275 PLA2G6O60733 806 aa25.18■■□□□ 1.62
LRP3-202ENST00000590275 CYBAP13498 195 aa25.18■■□□□ 1.62
LRP3-202ENST00000590275 IMMTQ16891 758 aaKnown RBP25.18■■□□□ 1.62
LRP3-202ENST00000590275 PPP4R3BQ5MIZ7 849 aa25.18■■□□□ 1.62
LRP3-202ENST00000590275 PRPF38BQ5VTL8 546 aaKnown RBP25.18■■□□□ 1.62
LRP3-202ENST00000590275 MFSD14CQ5VZR4 134 aa25.18■■□□□ 1.62
LRP3-202ENST00000590275 ESR2Q92731 530 aa25.18■■□□□ 1.62
LRP3-202ENST00000590275 PAWRQ96IZ0 340 aaKnown RBP25.18■■□□□ 1.62
LRP3-202ENST00000590275 CYP21A2P08686 494 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 PDHBP11177 359 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 CYB5R4Q7L1T6 521 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 FAM160B2Q86V87 743 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 DCAF4Q8WV16 495 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 FGD4Q96M96 766 aa25.17■■□□□ 1.62
LRP3-202ENST00000590275 DNAJC25-GNG10A0A024R161 153 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 SNHG28P0DPA3 235 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 CCDC96Q2M329 555 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 CHURC1Q8WUH1 139 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 TTC14Q96N46 770 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 GPCPD1Q9NPB8 672 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 CTNNA3Q9UI47 895 aa25.16■■□□□ 1.62
LRP3-202ENST00000590275 COL9A3Q14050 684 aaPredicted RBP25.15■■□□□ 1.62
LRP3-202ENST00000590275 KCTD2Q14681 263 aa25.15■■□□□ 1.62
LRP3-202ENST00000590275 CCDC174Q6PII3 467 aa25.15■■□□□ 1.62
LRP3-202ENST00000590275 BTNL9Q6UXG8 535 aa25.15■■□□□ 1.62
LRP3-202ENST00000590275 STOX1Q6ZVD7 989 aa25.15■■□□□ 1.62
LRP3-202ENST00000590275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.15■■□□□ 1.62
LRP3-202ENST00000590275 ENAHQ8N8S7 591 aaPredicted RBP25.15■■□□□ 1.62
LRP3-202ENST00000590275 ANKS1AQ92625 1134 aa25.15■■□□□ 1.62
LRP3-202ENST00000590275 OAZ1P54368 228 aa25.14■■□□□ 1.62
LRP3-202ENST00000590275 IKQ13123 557 aaPredicted RBP25.14■■□□□ 1.62
LRP3-202ENST00000590275 ANO1Q5XXA6 986 aa25.14■■□□□ 1.62
LRP3-202ENST00000590275 RUFY2Q8WXA3 655 aa25.14■■□□□ 1.62
LRP3-202ENST00000590275 CPVLQ9H3G5 476 aa25.14■■□□□ 1.62
LRP3-202ENST00000590275 HOMER2Q9NSB8 354 aa25.14■■□□□ 1.62
LRP3-202ENST00000590275 COPB2P35606 906 aa25.13■■□□□ 1.61
LRP3-202ENST00000590275 ZNF543Q08ER8 600 aa25.13■■□□□ 1.61
LRP3-202ENST00000590275 DGKHQ86XP1 1220 aa25.13■■□□□ 1.61
LRP3-202ENST00000590275 MAP4K1Q92918 833 aa25.13■■□□□ 1.61
LRP3-202ENST00000590275 ZSCAN10Q96SZ4 725 aaPredicted RBP25.13■■□□□ 1.61
LRP3-202ENST00000590275 DDX20Q9UHI6 824 aaKnown RBP25.13■■□□□ 1.61
LRP3-202ENST00000590275 PFASO15067 1338 aa25.12■■□□□ 1.61
LRP3-202ENST00000590275 GOLGA8HP0CJ92 632 aa25.12■■□□□ 1.61
LRP3-202ENST00000590275 MUM1L1Q5H9M0 696 aa25.12■■□□□ 1.61
LRP3-202ENST00000590275 LSG1Q9H089 658 aaKnown RBP25.12■■□□□ 1.61
LRP3-202ENST00000590275 RANBP17Q9H2T7 1088 aaKnown RBP25.12■■□□□ 1.61
LRP3-202ENST00000590275 DIS3Q9Y2L1 958 aaKnown RBP25.12■■□□□ 1.61
LRP3-202ENST00000590275 TNKSO95271 1327 aa25.12■■□□□ 1.61
LRP3-202ENST00000590275 CNGA1P29973 690 aa25.11■■□□□ 1.61
LRP3-202ENST00000590275 SEC23AQ15436 765 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms