RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 MGAMO43451 1857 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 HOXD10P28358 340 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 TTBK2Q6IQ55 1244 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 KIFC2Q96AC6 838 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 CHMP4CQ96CF2 233 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 PTPN22Q9Y2R2 807 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 DOCK3Q8IZD9 2030 aa21.94■■□□□ 1.1
MBD1-223ENST00000590215 TNPO2O14787 897 aaKnown RBP21.93■■□□□ 1.1
MBD1-223ENST00000590215 ZBED4O75132 1171 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 OAZ1P54368 228 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 TROAPQ12815 778 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 ASPRV1Q53RT3 343 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 FBXO46Q6PJ61 603 aaPredicted RBP21.93■■□□□ 1.1
MBD1-223ENST00000590215 SAMD1Q6SPF0 538 aaPredicted RBP21.93■■□□□ 1.1
MBD1-223ENST00000590215 SGMS1Q86VZ5 419 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 COA7Q96BR5 231 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 GPHNQ9NQX3 736 aaPredicted RBP21.93■■□□□ 1.1
MBD1-223ENST00000590215 PRR12Q9ULL5 1215 aa21.93■■□□□ 1.1
MBD1-223ENST00000590215 FRMPD2Q68DX3 1309 aaPredicted RBP21.92■■□□□ 1.1
MBD1-223ENST00000590215 SEC24BO95487 1268 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 STAT3P40763 770 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 SYDE2Q5VT97 1194 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 GPR142Q7Z601 462 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 RIOX2Q8IUF8 465 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 JAKMIP1Q96N16 626 aaKnown RBP21.92■■□□□ 1.1
MBD1-223ENST00000590215 MAP3K14Q99558 947 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 GPCPD1Q9NPB8 672 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 GJD2Q9UKL4 321 aa21.92■■□□□ 1.1
MBD1-223ENST00000590215 ISY1Q9ULR0 285 aaKnown RBP21.92■■□□□ 1.1
MBD1-223ENST00000590215 ECM2O94769 699 aaPredicted RBP21.91■■□□□ 1.1
MBD1-223ENST00000590215 SLC25A27O95847 323 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 PARP1P09874 1014 aaKnown RBP21.91■■□□□ 1.1
MBD1-223ENST00000590215 PSMA5P28066 241 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 IKQ13123 557 aaPredicted RBP21.91■■□□□ 1.1
MBD1-223ENST00000590215 PLEKHH3Q7Z736 793 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 FBXL16Q8N461 479 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 IL17RAQ96F46 866 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 TEX13BQ9BXU2 312 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 TM6SF1Q9BZW5 370 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 RANBP17Q9H2T7 1088 aaKnown RBP21.91■■□□□ 1.1
MBD1-223ENST00000590215 MROH8Q9H579 483 aa21.91■■□□□ 1.1
MBD1-223ENST00000590215 COL11A1P12107 1806 aaPredicted RBP21.91■■□□□ 1.1
MBD1-223ENST00000590215 HTTP42858 3142 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 ZNF536O15090 1300 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 PALM3A6NDB9 673 aaPredicted RBP21.9■■□□□ 1.1
MBD1-223ENST00000590215 GOLGA8HP0CJ92 632 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 ERCC3P19447 782 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 COPB2P35606 906 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 SLC16A2P36021 539 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 ANAPC15P60006 121 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 PRKCZQ05513 592 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 IRF5Q13568 498 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 GRM4Q14833 912 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 BLOC1S2Q6QNY1 142 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 CATIPQ7Z7H3 387 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 CCAR1Q8IX12 1150 aaKnown RBP21.9■■□□□ 1.1
MBD1-223ENST00000590215 USP6NLQ92738 828 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 MAD2L2Q9UI95 211 aa21.9■■□□□ 1.1
MBD1-223ENST00000590215 DDAH1O94760 285 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 PLS1Q14651 629 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 MORN1Q5T089 497 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 ZNF654Q8IZM8 581 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 TNS4Q8IZW8 715 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 GABRQQ9UN88 632 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 PTCH2Q9Y6C5 1203 aa21.89■■□□□ 1.09
MBD1-223ENST00000590215 STRNO43815 780 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 RPS6KB1P23443 525 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 PTPREP23469 700 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 FLT3LGP49771 235 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.88■■□□□ 1.09
MBD1-223ENST00000590215 STAG2Q8N3U4 1231 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 SOCS4Q8WXH5 440 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 TCEANC2Q96MN5 208 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 AGXT2Q9BYV1 514 aa21.88■■□□□ 1.09
MBD1-223ENST00000590215 RAVER2Q9HCJ3 691 aaKnown RBP21.88■■□□□ 1.09
MBD1-223ENST00000590215 CTDP1Q9Y5B0 961 aaPredicted RBP21.88■■□□□ 1.09
MBD1-223ENST00000590215 CCDC69A6NI79 296 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 SLC15A5A6NIM6 579 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 CPA1P15085 419 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
MBD1-223ENST00000590215 GRB14Q14449 540 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 SNRNP48Q6IEG0 339 aaKnown RBP21.87■■□□□ 1.09
MBD1-223ENST00000590215 ABRAQ8N0Z2 381 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 NUDT12Q9BQG2 462 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 RIPK3Q9Y572 518 aa21.87■■□□□ 1.09
MBD1-223ENST00000590215 PLXNB2O15031 1838 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 NFXL1Q6ZNB6 911 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 RUFY3Q7L099 469 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 NCAPG2Q86XI2 1143 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 CPXCR1Q8N123 301 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 PNMA2Q9UL42 364 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 HPS5Q9UPZ3 1129 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 SLC12A7Q9Y666 1083 aa21.86■■□□□ 1.09
MBD1-223ENST00000590215 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
MBD1-223ENST00000590215 ICAM1P05362 532 aa21.85■■□□□ 1.09
MBD1-223ENST00000590215 CALM1P0DP23 149 aa21.85■■□□□ 1.09
MBD1-223ENST00000590215 CALM2P0DP24 149 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms