RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 OSBPL5Q9H0X9 879 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 SYNPO2Q9UMS6 1093 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 SBF1O95248 1867 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
SMAD4-210ENST00000590061 ROBO3Q96MS0 1386 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
SMAD4-210ENST00000590061 WDHD1O75717 1129 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-210ENST00000590061 CDKL5O76039 1030 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMAD4-210ENST00000590061 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
SMAD4-210ENST00000590061 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 SDR42E1Q8WUS8 393 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
SMAD4-210ENST00000590061 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 TOMM22Q9NS69 142 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 TCP11L1Q9NUJ3 509 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 ZNF70Q9UC06 446 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-210ENST00000590061 HACL1Q9UJ83 578 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 ATRNL1Q5VV63 1379 aa8.58□□□□□ -1.04
SMAD4-210ENST00000590061 UNCXA6NJT0 531 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 WNT10BO00744 389 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 PRKAB2O43741 272 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 RANBP6O60518 1105 aaKnown RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 GPR37L1O60883 481 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 WFS1O76024 890 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 NF2P35240 595 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 C16orf86Q6ZW13 317 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 METTL16Q86W50 562 aaKnown RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 DGKHQ86XP1 1220 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 MAPKAPK5Q8IW41 473 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 RGS22Q8NE09 1264 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 DCPSQ96C86 337 aaKnown RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 ZNF274Q96GC6 653 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 ZBED3Q96IU2 234 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 PRMT6Q96LA8 375 aaPredicted RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 IL25Q9H293 177 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 SH2D4AQ9H788 454 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 CABP5Q9NP86 173 aa8.57□□□□□ -1.04
SMAD4-210ENST00000590061 ANGEL1Q9UNK9 670 aaKnown RBP8.57□□□□□ -1.04
SMAD4-210ENST00000590061 CCDC69A6NI79 296 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 TERTO14746 1132 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 IFIT3O14879 490 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 PRC1O43663 620 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 TSPY3P0CV98 308 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 TSPY8P0CW00 308 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 VEGFAP15692 232 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 PDCP20941 246 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 KIF5BP33176 963 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 GNAQP50148 359 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 EVCP57679 992 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 HAND2P61296 217 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 EXOSC10Q01780 885 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 PTK2Q05397 1052 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 PICALMQ13492 652 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 GRIK5Q16478 980 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 RCSD1Q6JBY9 416 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 CATIPQ7Z7H3 387 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 CSRNP1Q96S65 589 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 MAP3K14Q99558 947 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 KIF2CQ99661 725 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 LLPHQ9BRT6 129 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 TDRD3Q9H7E2 651 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 VEZTQ9HBM0 779 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 CDV3Q9UKY7 258 aaKnown RBP8.56□□□□□ -1.04
SMAD4-210ENST00000590061 LAMA4Q16363 1823 aa8.56□□□□□ -1.04
SMAD4-210ENST00000590061 SCN4AP35499 1836 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 MYH1P12882 1939 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 FOXP2O15409 715 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 PPP1R12BO60237 982 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 TRAF1Q13077 416 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 WTAPQ15007 396 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 SLFNL1Q499Z3 407 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 TMEM67Q5HYA8 995 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 RRP12Q5JTH9 1297 aaKnown RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 NFXL1Q6ZNB6 911 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 TMEM179Q6ZVK1 233 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 SGMS1Q86VZ5 419 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 MB21D2Q8IYB1 491 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 FAM177A1Q8N128 213 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 ANKS1AQ92625 1134 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 LZTS2Q9BRK4 669 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 MXD3Q9BW11 206 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
SMAD4-210ENST00000590061 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms