RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 GNAQP50148 359 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
CDK3-204ENST00000588812 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 FANCBQ8NB91 859 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 LZTS2Q9BRK4 669 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 MAD2L2Q9UI95 211 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
CDK3-204ENST00000588812 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
CDK3-204ENST00000588812 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
CDK3-204ENST00000588812 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 VWA5AO00534 786 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 FOXN1O15353 648 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 ZBED4O75132 1171 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 SLC16A2P36021 539 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 AK2P54819 239 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
CDK3-204ENST00000588812 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 STAG2Q8N3U4 1231 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 ATG4CQ96DT6 458 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 ZNF274Q96GC6 653 aaPredicted RBP12.94□□□□□ -0.34
CDK3-204ENST00000588812 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
CDK3-204ENST00000588812 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 PRR12Q9ULL5 1215 aa12.94□□□□□ -0.34
CDK3-204ENST00000588812 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 GOLGA8AA7E2F4 631 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 GPR25O00155 361 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 ST18O60284 1047 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 BCRP11274 1271 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 RXRAP19793 462 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 PDIA3P30101 505 aaKnown RBP12.93□□□□□ -0.34
CDK3-204ENST00000588812 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDK3-204ENST00000588812 RTN1Q16799 776 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
CDK3-204ENST00000588812 RLFQ13129 1914 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
CDK3-204ENST00000588812 OAZ1P54368 228 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 ERVK-9P63128 1117 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 ERVK-24P63145 666 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 CCNA1P78396 465 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 SP3Q02447 781 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 ADGRF4Q8IZF3 695 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 TXNRD2Q9NNW7 524 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 NID2Q14112 1375 aa12.92□□□□□ -0.34
CDK3-204ENST00000588812 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 CNMDO75829 334 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 STAT3P40763 770 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
CDK3-204ENST00000588812 PLS1Q14651 629 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 KIF22Q14807 665 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 TMEM132BQ14DG7 1078 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 REPS2Q8NFH8 660 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
CDK3-204ENST00000588812 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
CDK3-204ENST00000588812 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
CDK3-204ENST00000588812 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 RIOX1Q9H6W3 641 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 TSKSQ9UJT2 592 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
CDK3-204ENST00000588812 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 FKTNO75072 461 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 PLEKHA8P1O95397 391 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 SLC25A27O95847 323 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 COPB2P35606 906 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 MCM2P49736 904 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 TRAF1Q13077 416 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 CCAR1Q8IX12 1150 aaKnown RBP12.9□□□□□ -0.34
CDK3-204ENST00000588812 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
CDK3-204ENST00000588812 ZSCAN31Q96LW9 406 aaPredicted RBP12.9□□□□□ -0.34
CDK3-204ENST00000588812 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
CDK3-204ENST00000588812 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
CDK3-204ENST00000588812 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms