RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 CCDC148Q8NFR7 591 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 NKX2-3Q8TAU0 364 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 ANKS1AQ92625 1134 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 DHX58Q96C10 678 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 NSUN4Q96CB9 384 aaKnown RBP15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 SETDB2Q96T68 719 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 PPP2R2CQ9Y2T4 447 aa15.91■□□□□ 0.14
NEDD4L-223ENST00000588516 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 USP17L21D6R901 530 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 GTPBP6O43824 516 aaPredicted RBP15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 BAG3O95817 575 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 CCDC175P0C221 793 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 PPP1R2P41236 205 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 GRM1Q13255 1194 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 PFKFB3Q16875 520 aaPredicted RBP15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 CCDC47Q96A33 483 aaKnown RBP15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 KAT14Q9H8E8 782 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 MAGEF1Q9HAY2 307 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 VPS54Q9P1Q0 977 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 DICER1Q9UPY3 1922 aaKnown RBP15.9■□□□□ 0.14
NEDD4L-223ENST00000588516 KIF20AO95235 890 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 PDE6BP35913 854 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 DPYDQ12882 1025 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 DPF2Q92785 391 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
NEDD4L-223ENST00000588516 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 SNAP23O00161 211 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 BMP6P22004 513 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 MECOMQ03112 1051 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 STIM1Q13586 685 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 SPECC1Q5M775 1068 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 MAP1SQ66K74 1059 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 ADGRA1Q86SQ6 560 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 DZIP1Q86YF9 867 aaKnown RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 SYMPKQ92797 1274 aaKnown RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 CUEDC2Q9H467 287 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 DCP1AQ9NPI6 582 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 TCP11L1Q9NUJ3 509 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 RWDD2AQ9UIY3 292 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 LEMD3Q9Y2U8 911 aa15.88■□□□□ 0.13
NEDD4L-223ENST00000588516 URI1O94763 535 aaPredicted RBP15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 DYNLL1P63167 89 aaKnown RBP15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 PTGDRQ13258 359 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 CDKAL1Q5VV42 579 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 TRIM65Q6PJ69 517 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 TMTC1Q8IUR5 882 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 TC2NQ8N9U0 490 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
NEDD4L-223ENST00000588516 TUBBP07437 444 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 H2AFXP16104 143 aaPredicted RBP15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 EPHX2P34913 555 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 ECE1P42892 770 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 CUL4BQ13620 913 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 ZNF174Q15697 407 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 ELF2Q15723 593 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 TMEM139Q8IV31 216 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 SLF2Q8IX21 1173 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 BLIDQ8IZY5 108 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 DAGLBQ8NCG7 672 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 CAPNS2Q96L46 248 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 MCOLN1Q9GZU1 580 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 MYO1AQ9UBC5 1043 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 LIMA1Q9UHB6 759 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 PCDHA4Q9UN74 947 aa15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 TTF2Q9UNY4 1162 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 BAZ2AQ9UIF9 1905 aaKnown RBP15.86■□□□□ 0.13
NEDD4L-223ENST00000588516 FER1L6Q2WGJ9 1857 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 LRRC10BA6NIK2 292 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 H7C1D1 291 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 NPHP1O15259 732 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 KIF5CO60282 957 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 PLCG2P16885 1265 aa15.85■□□□□ 0.13
NEDD4L-223ENST00000588516 SMARCA1P28370 1054 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms