RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 BTBD18B2RXH4 712 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PLA2G6O60733 806 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 KRT2P35908 639 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SLC16A2P36021 539 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 MAP3K11Q16584 847 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NOSTRINQ8IVI9 506 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CCDC148Q8NFR7 591 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 LPAR1Q92633 364 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FEZ1Q99689 392 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SNCAIPQ9Y6H5 919 aa13.74□□□□□ -0.21
TNFRSF11A-203ENST00000587697 TMEM232C9JQI7 657 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ZBTB5O15062 677 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FIBPO43427 364 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 RAD21O60216 631 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CALML3P27482 149 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NF2P35240 595 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 MAP3K9P80192 1104 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NBR1Q14596 966 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FAM83BQ5T0W9 1011 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
TNFRSF11A-203ENST00000587697 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 M0R2N6 131 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 STAT2P52630 851 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 USP14P54578 494 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NR5A1Q13285 461 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 VGLL4Q14135 290 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ZNF280CQ8ND82 737 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CCDC12Q8WUD4 166 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 RRAGCQ9HB90 399 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PRR12Q9ULL5 1215 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ADAMTS3O15072 1205 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PRPF40AO75400 957 aaKnown RBP13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NAPAP54920 295 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 BACE1P56817 501 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 NLRP5P59047 1200 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 SPP2Q13103 211 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 MTMR2Q13614 643 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 PRKG1Q13976 671 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FAM160B2Q86V87 743 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 BLIDQ8IZY5 108 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 EMILIN3Q9NT22 766 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 ISY1Q9ULR0 285 aaKnown RBP13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
TNFRSF11A-203ENST00000587697 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 VCAM1P19320 739 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 TOB1P50616 345 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 LDHDQ86WU2 507 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
TNFRSF11A-203ENST00000587697 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 YEATS4O95619 227 aa13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 GNA11P29992 359 aa13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 DGKZQ13574 1117 aa13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF11A-203ENST00000587697 NOM1Q5C9Z4 860 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms