RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ZNF444Q8N0Y2 327 aaPredicted RBP22.37■■□□□ 1.17
MBD1-216ENST00000587605 CCSER1Q9C0I3 900 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 BLZF1Q9H2G9 400 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 MAD2L2Q9UI95 211 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 BTAF1O14981 1849 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 SOWAHDA6NJG2 315 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 TSPY3P0CV98 308 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 TSPY8P0CW00 308 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 GRAPQ13588 217 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 TCP11X2Q5H9J9 407 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 GRAPLQ8TC17 118 aaPredicted RBP22.37■■□□□ 1.17
MBD1-216ENST00000587605 CCDC12Q8WUD4 166 aaPredicted RBP22.37■■□□□ 1.17
MBD1-216ENST00000587605 RABGGTAQ92696 567 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 PKNOX2Q96KN3 472 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 MTRQ99707 1265 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 BARHL2Q9NY43 387 aa22.37■■□□□ 1.17
MBD1-216ENST00000587605 GYPCP04921 128 aa22.36■■□□□ 1.17
MBD1-216ENST00000587605 STIM1Q13586 685 aa22.36■■□□□ 1.17
MBD1-216ENST00000587605 RAD9BQ6WBX8 426 aa22.36■■□□□ 1.17
MBD1-216ENST00000587605 DESI2Q9BSY9 194 aa22.36■■□□□ 1.17
MBD1-216ENST00000587605 MRPL44Q9H9J2 332 aaKnown RBP22.36■■□□□ 1.17
MBD1-216ENST00000587605 KCNJ18B7U540 433 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 ZRANB2O95218 330 aaKnown RBP eCLIP22.35■■□□□ 1.17
MBD1-216ENST00000587605 CASP14P31944 242 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 KCNJ12Q14500 433 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 RSRC2Q7L4I2 434 aaKnown RBP22.35■■□□□ 1.17
MBD1-216ENST00000587605 TXNRD3Q86VQ6 643 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 NOC3LQ8WTT2 800 aaKnown RBP22.35■■□□□ 1.17
MBD1-216ENST00000587605 GOLGA1Q92805 767 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 AK8Q96MA6 479 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 MYO1AQ9UBC5 1043 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 FAM205AQ6ZU69 1335 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 TNRC6CQ9HCJ0 1690 aaKnown RBP22.35■■□□□ 1.17
MBD1-216ENST00000587605 PALM3A6NDB9 673 aaPredicted RBP22.35■■□□□ 1.17
MBD1-216ENST00000587605 CYP26C1Q6V0L0 522 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 SH3RF3Q8TEJ3 882 aaPredicted RBP22.35■■□□□ 1.17
MBD1-216ENST00000587605 SPZ1Q9BXG8 430 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 ANKIB1Q9P2G1 1089 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 PCDHA6Q9UN73 950 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 PCDHA8Q9Y5H6 950 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 FHOD1Q9Y613 1164 aa22.35■■□□□ 1.17
MBD1-216ENST00000587605 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
MBD1-216ENST00000587605 ORC2Q13416 577 aaPredicted RBP22.34■■□□□ 1.17
MBD1-216ENST00000587605 KARSQ15046 597 aaKnown RBP22.34■■□□□ 1.17
MBD1-216ENST00000587605 ADSSL1Q8N142 457 aa22.34■■□□□ 1.17
MBD1-216ENST00000587605 STAMQ92783 540 aa22.34■■□□□ 1.17
MBD1-216ENST00000587605 GPKOWQ92917 476 aaPredicted RBP eCLIP22.34■■□□□ 1.17
MBD1-216ENST00000587605 STXBP3O00186 592 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 PNMA6AP0CW24 399 aaPredicted RBP22.33■■□□□ 1.17
MBD1-216ENST00000587605 VEGFAP15692 232 aaPredicted RBP22.33■■□□□ 1.17
MBD1-216ENST00000587605 EEF1GP26641 437 aaKnown RBP22.33■■□□□ 1.17
MBD1-216ENST00000587605 PPP1R2P41236 205 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 MTF1Q14872 753 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 KRT25Q7Z3Z0 450 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 STAG2Q8N3U4 1231 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 CPLX3Q8WVH0 158 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 THAP9Q9H5L6 903 aa22.33■■□□□ 1.17
MBD1-216ENST00000587605 BAZ2BQ9UIF8 2168 aaKnown RBP22.33■■□□□ 1.17
MBD1-216ENST00000587605 PLCG2P16885 1265 aa22.33■■□□□ 1.16
MBD1-216ENST00000587605 CCT6AP40227 531 aaKnown RBP22.33■■□□□ 1.16
MBD1-216ENST00000587605 UBA7P41226 1012 aa22.33■■□□□ 1.16
MBD1-216ENST00000587605 CEP112Q8N8E3 955 aa22.33■■□□□ 1.16
MBD1-216ENST00000587605 CCDC47Q96A33 483 aaKnown RBP22.33■■□□□ 1.16
MBD1-216ENST00000587605 ABHD10Q9NUJ1 306 aa22.33■■□□□ 1.16
MBD1-216ENST00000587605 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.16
MBD1-216ENST00000587605 A0A1W2PQC6 194 aa22.32■■□□□ 1.16
MBD1-216ENST00000587605 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
MBD1-216ENST00000587605 PRCPP42785 496 aa22.32■■□□□ 1.16
MBD1-216ENST00000587605 FXR1P51114 621 aaKnown RBP eCLIP22.32■■□□□ 1.16
MBD1-216ENST00000587605 KCNQ4P56696 695 aa22.32■■□□□ 1.16
MBD1-216ENST00000587605 RHOBTB3O94955 611 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 TERF2Q15554 542 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 HEATR3Q7Z4Q2 680 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 RASSF8Q8NHQ8 419 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 ARHGEF1Q92888 912 aaKnown RBP22.31■■□□□ 1.16
MBD1-216ENST00000587605 DYNLL2Q96FJ2 89 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 TMEM47Q9BQJ4 181 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 KBTBD4Q9NVX7 518 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 TAF1LQ8IZX4 1826 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 PSMA7O14818 248 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 NUP88Q99567 741 aaPredicted RBP22.31■■□□□ 1.16
MBD1-216ENST00000587605 ZMYND12Q9H0C1 365 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 VPS16Q9H269 839 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 TAB2Q9NYJ8 693 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 CDC23Q9UJX2 597 aa22.31■■□□□ 1.16
MBD1-216ENST00000587605 LY75O60449 1722 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 USP17L3A6NCW0 530 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 USP17L4A6NCW7 530 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 ADAMTS3O15072 1205 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 RASA1P20936 1047 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 GNA11P29992 359 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 NAALADL2Q58DX5 795 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 TYW1BQ6NUM6 668 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 USP17L1Q7RTZ2 530 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 SRGAP1Q7Z6B7 1085 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 SLF2Q8IX21 1173 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 DHTKD1Q96HY7 919 aaPredicted RBP22.3■■□□□ 1.16
MBD1-216ENST00000587605 LZTFL1Q9NQ48 299 aa22.3■■□□□ 1.16
MBD1-216ENST00000587605 DDX60LQ5H9U9 1706 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms