RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 TOX2Q96NM4 488 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 TM9SF2Q99805 663 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 KCNK12Q9HB15 430 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 PRR13Q9NZ81 148 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
VMP1-205ENST00000587470 GPR160Q9UJ42 338 aa7.12□□□□□ -1.27
VMP1-205ENST00000587470 TMEM82A0PJX8 343 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 C1QTNF9P0C862 333 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 BBS9Q3SYG4 887 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 RBBP8NLQ8NC74 664 aaPredicted RBP7.11□□□□□ -1.27
VMP1-205ENST00000587470 KCNN1Q92952 543 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
VMP1-205ENST00000587470 MAP6Q96JE9 813 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 MINPP1Q9UNW1 487 aa7.11□□□□□ -1.27
VMP1-205ENST00000587470 NOTOA8MTQ0 251 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 FKTNO75072 461 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 ENDOUP21128 410 aaKnown RBP7.1□□□□□ -1.27
VMP1-205ENST00000587470 COL9A2Q14055 689 aaPredicted RBP7.1□□□□□ -1.27
VMP1-205ENST00000587470 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 FBXW10Q5XX13 1052 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 CCDC144CPQ8IYA2 1237 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 SPATA32Q96LK8 384 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 GFOD1Q9NXC2 390 aa7.1□□□□□ -1.27
VMP1-205ENST00000587470 FAM86C2PA6NEL3 165 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 C9IYK1 514 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 ETV2O00321 342 aaPredicted RBP7.09□□□□□ -1.27
VMP1-205ENST00000587470 NRDCO43847 1150 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 USP2O75604 605 aaPredicted RBP7.09□□□□□ -1.27
VMP1-205ENST00000587470 GLDCP23378 1020 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 BMP8BP34820 402 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 PMS1P54277 932 aaKnown RBP7.09□□□□□ -1.27
VMP1-205ENST00000587470 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 NLRX1Q86UT6 975 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 METTL16Q86W50 562 aaKnown RBP7.09□□□□□ -1.27
VMP1-205ENST00000587470 SMARCC1Q92922 1105 aaPredicted RBP7.09□□□□□ -1.27
VMP1-205ENST00000587470 TNFRSF10DQ9UBN6 386 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
VMP1-205ENST00000587470 MEIS1O00470 390 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 PEX10O60683 326 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 GUCY2CP25092 1073 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 PDE6BP35913 854 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 PAK2Q13177 524 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 ZPBP2Q6X784 338 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 ATG14Q6ZNE5 492 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 ZSCAN18Q8TBC5 510 aaPredicted RBP7.08□□□□□ -1.28
VMP1-205ENST00000587470 HHIPL1Q96JK4 782 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 FCRL2Q96LA5 508 aaPredicted RBP7.08□□□□□ -1.28
VMP1-205ENST00000587470 ZNF552Q9H707 407 aaPredicted RBP7.08□□□□□ -1.28
VMP1-205ENST00000587470 CRTAC1Q9NQ79 661 aa7.08□□□□□ -1.28
VMP1-205ENST00000587470 GSNP06396 782 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 VAV1P15498 845 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 CTSKP43235 329 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 RTP1P59025 263 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 ZNF605Q86T29 641 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
VMP1-205ENST00000587470 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 GINM1Q9NU53 330 aa7.07□□□□□ -1.28
VMP1-205ENST00000587470 TCAF2A6NFQ2 919 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 FADS2P1A8MWK0 482 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 SHOXO15266 292 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 ZNF205O95201 554 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 GALK1P51570 392 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 ZYXQ15942 572 aaKnown RBP7.06□□□□□ -1.28
VMP1-205ENST00000587470 RUFY4Q6ZNE9 571 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 SIRT2Q8IXJ6 389 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 LRRC56Q8IYG6 542 aaPredicted RBP7.06□□□□□ -1.28
VMP1-205ENST00000587470 DSCC1Q9BVC3 393 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 MCOLN1Q9GZU1 580 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 CD320Q9NPF0 282 aa7.06□□□□□ -1.28
VMP1-205ENST00000587470 MYOCOSA0A1B0GUC4 107 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 OR14I1A6ND48 311 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 WTIPA6NIX2 430 aaPredicted RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 NPIPB6E9PJ23 425 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 SEMA7AO75326 666 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 EFEMP2O95967 443 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 PNLIPP16233 465 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 SOX9P48436 509 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 TRIM26Q12899 539 aaPredicted RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 KCNA10Q16322 511 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 NOL9Q5SY16 702 aaKnown RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 TDRD10Q5VZ19 366 aaKnown RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 TMEM132EQ6IEE7 984 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 LSRQ86X29 649 aaPredicted RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 RASGRP4Q8TDF6 673 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 CDADC1Q9BWV3 514 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 EFR3BQ9Y2G0 817 aa7.05□□□□□ -1.28
VMP1-205ENST00000587470 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.05□□□□□ -1.28
VMP1-205ENST00000587470 TEX51A0A1B0GUA7 166 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 DLG4P78352 724 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 HDLBPQ00341 1268 aaKnown RBP7.04□□□□□ -1.28
VMP1-205ENST00000587470 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
VMP1-205ENST00000587470 DCAF15Q66K64 600 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms