RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PDHBP11177 359 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 EEF2P13639 858 aaKnown RBP23.52■■□□□ 1.36
ATG4D-204ENST00000586417 ATP2B2Q01814 1243 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 CST9Q5W186 159 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 USP17L2Q6R6M4 530 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 LRRC47Q8N1G4 583 aaKnown RBP23.52■■□□□ 1.36
ATG4D-204ENST00000586417 SPZ1Q9BXG8 430 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 KANSL2Q9H9L4 492 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 CLIP2Q9UDT6 1046 aa23.52■■□□□ 1.36
ATG4D-204ENST00000586417 USP17L5A8MUK1 530 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 MAP3K9P80192 1104 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 ICA1Q05084 483 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 VGLL4Q14135 290 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 STK38Q15208 465 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 LRSAM1Q6UWE0 723 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 SCYL3Q8IZE3 742 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 KCNG4Q8TDN1 519 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 TRPM7Q96QT4 1865 aa23.51■■□□□ 1.35
ATG4D-204ENST00000586417 IREB2P48200 963 aaKnown RBP23.5■■□□□ 1.35
ATG4D-204ENST00000586417 BICD2Q8TD16 824 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 CLMNQ96JQ2 1002 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 PCDHA7Q9UN72 937 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 A0A1W2PRG0 241 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 SPTLC2O15270 562 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 SMARCA1P28370 1054 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 KRT2P35908 639 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 ME1P48163 572 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 TOB1P50616 345 aaPredicted RBP23.5■■□□□ 1.35
ATG4D-204ENST00000586417 SLC39A14Q15043 492 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 PTPAQ15257 358 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 SF3A1Q15459 793 aaKnown RBP23.5■■□□□ 1.35
ATG4D-204ENST00000586417 MAP3K11Q16584 847 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 L1TD1Q5T7N2 865 aaKnown RBP23.5■■□□□ 1.35
ATG4D-204ENST00000586417 ACER1Q8TDN7 264 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 TNFRSF25Q93038 417 aa23.5■■□□□ 1.35
ATG4D-204ENST00000586417 ECE1P42892 770 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 CPVLQ9H3G5 476 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 NYAP2Q9P242 653 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 SNCAIPQ9Y6H5 919 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 PHIPQ8WWQ0 1821 aa23.49■■□□□ 1.35
ATG4D-204ENST00000586417 TOMM70O94826 608 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 PTPRAP18433 802 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
ATG4D-204ENST00000586417 ARMC9Q7Z3E5 817 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 SMC1BQ8NDV3 1235 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 GRPEL1Q9HAV7 217 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 GBA2Q9HCG7 927 aaPredicted RBP23.48■■□□□ 1.35
ATG4D-204ENST00000586417 SH3GLB2Q9NR46 395 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 DACT1Q9NYF0 836 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 PASKQ96RG2 1323 aa23.48■■□□□ 1.35
ATG4D-204ENST00000586417 ASPRV1Q53RT3 343 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 ADALQ6DHV7 355 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 CNKSR2Q8WXI2 1034 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 GOLPH3LQ9H4A5 285 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 PICK1Q9NRD5 415 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 NR1I2O75469 434 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 MRE11P49959 708 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 RILPL1Q5EBL4 403 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 EARS2Q5JPH6 523 aaKnown RBP23.47■■□□□ 1.35
ATG4D-204ENST00000586417 LDLRAD1Q5T700 205 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 TYW1BQ6NUM6 668 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 CCAR1Q8IX12 1150 aaKnown RBP23.47■■□□□ 1.35
ATG4D-204ENST00000586417 ANKRD13AQ8IZ07 590 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 GPKOWQ92917 476 aaPredicted RBP eCLIP23.47■■□□□ 1.35
ATG4D-204ENST00000586417 MKL1Q969V6 931 aa23.47■■□□□ 1.35
ATG4D-204ENST00000586417 DDX19AQ9NUU7 478 aaKnown RBP23.47■■□□□ 1.35
ATG4D-204ENST00000586417 A0A1W2PQ27 194 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 A0A1W2PQ64 194 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 A0A1W2PQD8 194 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 LETM1O95202 739 aaPredicted RBP23.46■■□□□ 1.35
ATG4D-204ENST00000586417 AXDND1Q5T1B0 1012 aaPredicted RBP23.46■■□□□ 1.35
ATG4D-204ENST00000586417 WWC2Q6AWC2 1192 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 RIOX1Q9H6W3 641 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 ELP3Q9H9T3 547 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 GINM1Q9NU53 330 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 CSADQ9Y600 493 aa23.46■■□□□ 1.35
ATG4D-204ENST00000586417 FAM205CA6NFA0 338 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 XRCC6P12956 609 aaKnown RBP eCLIP23.45■■□□□ 1.34
ATG4D-204ENST00000586417 ZNF543Q08ER8 600 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 RBM46Q8TBY0 533 aaKnown RBP23.45■■□□□ 1.34
ATG4D-204ENST00000586417 BRMS1Q9HCU9 246 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 ZHX2Q9Y6X8 837 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 FRMPD2Q68DX3 1309 aaPredicted RBP23.45■■□□□ 1.34
ATG4D-204ENST00000586417 STXBP3O00186 592 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 ADAMTS3O15072 1205 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 PPP6R2O75170 966 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 NLRP5P59047 1200 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 C2orf69Q8N8R5 385 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 ENGASEQ8NFI3 743 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.45■■□□□ 1.34
ATG4D-204ENST00000586417 BARHL2Q9NY43 387 aa23.45■■□□□ 1.34
ATG4D-204ENST00000586417 UBA5Q9GZZ9 404 aa23.44■■□□□ 1.34
ATG4D-204ENST00000586417 NUP62CLQ9H1M0 184 aa23.44■■□□□ 1.34
ATG4D-204ENST00000586417 CLSTN2Q9H4D0 955 aa23.44■■□□□ 1.34
ATG4D-204ENST00000586417 CALML3P27482 149 aa23.43■■□□□ 1.34
ATG4D-204ENST00000586417 SNW1Q13573 536 aaKnown RBP23.43■■□□□ 1.34
ATG4D-204ENST00000586417 DGKZQ13574 1117 aa23.43■■□□□ 1.34
ATG4D-204ENST00000586417 ZYXQ15942 572 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms