RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
TREM1-203ENST00000586287 FOXD4L1Q9NU39 408 aa9.55□□□□□ -0.88
TREM1-203ENST00000586287 TMOD4Q9NZQ9 345 aa9.55□□□□□ -0.88
TREM1-203ENST00000586287 ABT1Q9ULW3 272 aaKnown RBP9.55□□□□□ -0.88
TREM1-203ENST00000586287 PTPRFP10586 1907 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 RASSF10A6NK89 507 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 CPLX1O14810 134 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 PRPF3O43395 683 aaKnown RBP9.54□□□□□ -0.88
TREM1-203ENST00000586287 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
TREM1-203ENST00000586287 STAT2P52630 851 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 GTF2A2P52657 109 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 POTEEQ6S8J3 1075 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 GADL1Q6ZQY3 521 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 FASTKD5Q7L8L6 764 aaKnown RBP9.54□□□□□ -0.88
TREM1-203ENST00000586287 DNAJC5GQ8N7S2 189 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 PTPN18Q99952 460 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 RNF26Q9BY78 433 aaPredicted RBP9.54□□□□□ -0.88
TREM1-203ENST00000586287 FEM1BQ9UK73 627 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 PRR12Q9ULL5 1215 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 ADAMTS5Q9UNA0 930 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 AGTPBP1Q9UPW5 1226 aa9.54□□□□□ -0.88
TREM1-203ENST00000586287 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
TREM1-203ENST00000586287 LOC285556D6RIA3 1793 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CCL15-CCL14A0A0B4J2E2 113 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 hCG_1642624A0A1W2PR95 340 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 BTBD19C9JJ37 291 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CETPP11597 493 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 GJB2P29033 226 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 DSG3P32926 999 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 DDIT3P35638 169 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 HMGN5P82970 282 aaKnown RBP9.53□□□□□ -0.88
TREM1-203ENST00000586287 SSRP1Q08945 709 aaKnown RBP9.53□□□□□ -0.88
TREM1-203ENST00000586287 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CCL15Q16663 113 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 DEFB115Q30KQ5 88 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 SYDE2Q5VT97 1194 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CYP4F22Q6NT55 531 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CPLX2Q6PUV4 134 aaKnown RBP9.53□□□□□ -0.88
TREM1-203ENST00000586287 FAM160B2Q86V87 743 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CHURC1Q8WUH1 139 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 CCDC102AQ96A19 550 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 SHISA4Q96DD7 197 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 DDX11Q96FC9 970 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 AIFM3Q96NN9 605 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 PIGSQ96S52 555 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 VAT1LQ9HCJ6 419 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 PPP1R9AQ9ULJ8 1098 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.53□□□□□ -0.88
TREM1-203ENST00000586287 STK36Q9NRP7 1315 aa9.53□□□□□ -0.88
TREM1-203ENST00000586287 RLFQ13129 1914 aa9.52□□□□□ -0.88
TREM1-203ENST00000586287 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 ZBTB5O15062 677 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 PPP1R11O60927 126 aaPredicted RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 FLOT1O75955 427 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 CDKL5O76039 1030 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 DEXIO95424 95 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 SNAP25P60880 206 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 HTRA3P83110 453 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 COG2Q14746 738 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 PFKFB3Q16875 520 aaPredicted RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 ANKRD23Q86SG2 305 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 PRPF38AQ8NAV1 312 aaKnown RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 REPS2Q8NFH8 660 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 P2RX7Q99572 595 aaKnown RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 TANGO6Q9C0B7 1094 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 ASCC2Q9H1I8 757 aaPredicted RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 RANBP17Q9H2T7 1088 aaKnown RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 ORC3Q9UBD5 711 aaPredicted RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
TREM1-203ENST00000586287 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 ZNF536O15090 1300 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 MYPNQ86TC9 1320 aa9.52□□□□□ -0.89
TREM1-203ENST00000586287 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 MANSC4A6NHS7 340 aaPredicted RBP9.51□□□□□ -0.89
TREM1-203ENST00000586287 IGF2BP3O00425 579 aaKnown RBP eCLIP9.51□□□□□ -0.89
TREM1-203ENST00000586287 VWA5AO00534 786 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 SCG2P13521 617 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
TREM1-203ENST00000586287 QRICH1Q2TAL8 776 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 LBX2Q6XYB7 198 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 PIBF1Q8WXW3 757 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 ATG4CQ96DT6 458 aa9.51□□□□□ -0.89
TREM1-203ENST00000586287 RRP36Q96EU6 259 aaKnown RBP9.51□□□□□ -0.89
TREM1-203ENST00000586287 SLC38A10Q9HBR0 1119 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms