RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CNTNAP1P78357 1384 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 THSD7BQ9C0I4 1608 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 NAT1P18440 290 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
ZNF540-203ENST00000586134 NEK4P51957 841 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 ACTN3Q08043 901 aaPredicted RBP11.17□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 UBE3BQ7Z3V4 1068 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 CEP57Q86XR8 500 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 FAM114A1Q8IWE2 563 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 HDAC7Q8WUI4 952 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
ZNF540-203ENST00000586134 RBM41Q96IZ5 413 aaKnown RBP11.17□□□□□ -0.62
ZNF540-203ENST00000586134 YIPF2Q9BWQ6 316 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 MRFAP1Q9Y605 127 aa11.17□□□□□ -0.62
ZNF540-203ENST00000586134 ECE2O60344 883 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 RNF40O75150 1001 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 GJA8P48165 433 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ZBED6P86452 979 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 CASP8Q14790 479 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 TNMDQ9H2S6 317 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 UNC45AQ9H3U1 944 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ACTR5Q9H9F9 607 aaPredicted RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 N4BP1O75113 896 aaKnown RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 E2F6O75461 281 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 UFL1O94874 794 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 F13A1P00488 732 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ZNF24P17028 368 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ATP5JP18859 108 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 IRAK1P51617 712 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 HTRA3P83110 453 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC15Q0P6D6 951 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PPFIA1Q13136 1202 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 THEMIS2Q5TEJ8 643 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ZNF280DQ6N043 979 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 TRIM4Q9C037 500 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 GREM2Q9H772 168 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 PAPOLBQ9NRJ5 636 aaKnown RBP11.16□□□□□ -0.62
ZNF540-203ENST00000586134 ANKIB1Q9P2G1 1089 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 LEMD3Q9Y2U8 911 aa11.16□□□□□ -0.62
ZNF540-203ENST00000586134 POLR2AP24928 1970 aaKnown RBP11.15□□□□□ -0.62
ZNF540-203ENST00000586134 FRMD3A2A2Y4 597 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 RASSF10A6NK89 507 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 H7C1D1 291 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 ZSCAN12O43309 604 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 ZEB2O60315 1214 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 RAD17O75943 681 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 TRIM27P14373 513 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 VCAM1P19320 739 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 IGHMBP2P38935 993 aaKnown RBP11.15□□□□□ -0.62
ZNF540-203ENST00000586134 ATP2B2Q01814 1243 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 TTC22Q5TAA0 569 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 GALNT15Q8N3T1 639 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 SMCR8Q8TEV9 937 aaPredicted RBP11.15□□□□□ -0.62
ZNF540-203ENST00000586134 ARHGAP45Q92619 1136 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 TEKT1Q969V4 418 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 GORASP1Q9BQQ3 440 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 SLC39A2Q9NP94 309 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 TRPV5Q9NQA5 729 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 TMOD4Q9NZQ9 345 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 UTYO14607 1347 aa11.15□□□□□ -0.62
ZNF540-203ENST00000586134 PSMD14O00487 310 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 RNF8O76064 485 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 GNAI3P08754 354 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 CUL3Q13618 768 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 MAP1SQ66K74 1059 aaPredicted RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 CCDC80Q76M96 950 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 FAM177A1Q8N128 213 aaPredicted RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 AGBL3Q8NEM8 1001 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 BCAS4Q8TDM0 211 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 CNOT7Q9UIV1 285 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 G3BP2Q9UN86 482 aaKnown RBP11.14□□□□□ -0.63
ZNF540-203ENST00000586134 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 SMAPO00193 183 aa11.14□□□□□ -0.63
ZNF540-203ENST00000586134 GRM8O00222 908 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms