RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 GPAT2Q6NUI2 795 aa20.67■□□□□ 0.9
RBFOX1-222ENST00000585867 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
RBFOX1-222ENST00000585867 PTPN18Q99952 460 aa20.67■□□□□ 0.9
RBFOX1-222ENST00000585867 FAM217BQ9NTX9 383 aaPredicted RBP20.67■□□□□ 0.9
RBFOX1-222ENST00000585867 F13A1P00488 732 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 PDHBP11177 359 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 SLC1A4P43007 532 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 NTRK3Q16288 839 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 DCAF4Q8WV16 495 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 GMCL1Q96IK5 515 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 RPAP3Q9H6T3 665 aaPredicted RBP20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 AGTPBP1Q9UPW5 1226 aa20.66■□□□□ 0.9
RBFOX1-222ENST00000585867 FMNL1O95466 1100 aaPredicted RBP20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 SNHG28P0DPA3 235 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 BMP3P12645 472 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 MAP2K2P36507 400 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 TM4SF4P48230 202 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 GNAQP50148 359 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 LOC285556D6RIA3 1793 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 MYH6P13533 1939 aa20.65■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L15C9J2P7 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 BTBD19C9JJ37 291 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L13C9JLJ4 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L11C9JVI0 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L18D6R9N7 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L22D6RA61 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L17D6RBQ6 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L19D6RCP7 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L20D6RJB6 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 BAG4O95429 457 aaKnown RBP20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 FDPSP14324 419 aaKnown RBP20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 MCM4P33991 863 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 USP17L24Q0WX57 530 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 KCTD1Q719H9 257 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 REM2Q8IYK8 340 aaPredicted RBP20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.9
RBFOX1-222ENST00000585867 FRMPD2Q68DX3 1309 aaPredicted RBP20.64■□□□□ 0.89
RBFOX1-222ENST00000585867 PARP1P09874 1014 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 AKAP17AQ02040 695 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 ZNF543Q08ER8 600 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 PABPC4Q13310 644 aaKnown RBP eCLIP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 FOXD4L5Q5VV16 416 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 CATSPERGQ6ZRH7 1159 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 IFNL1Q8IU54 200 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 FOXD4L4Q8WXT5 416 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 C8orf76Q96K31 380 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 SLC26A6Q9BXS9 759 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 RNF26Q9BY78 433 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 GPCPD1Q9NPB8 672 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 PDHXO00330 501 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 IGF2BP3O00425 579 aaKnown RBP eCLIP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 DEXIO95424 95 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 GOLGA8HP0CJ92 632 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 GRM4Q14833 912 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 OTUD7BQ6GQQ9 843 aa20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-222ENST00000585867 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 OSBPP22059 807 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 TRIM29Q14134 588 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 ASPRV1Q53RT3 343 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 TMTC3Q6ZXV5 915 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 LZTS2Q9BRK4 669 aa20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 ZSCAN16Q9H4T2 348 aaPredicted RBP20.62■□□□□ 0.89
RBFOX1-222ENST00000585867 DTNBO60941 627 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 GPATCH4Q5T3I0 446 aaKnown RBP20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 TTBK2Q6IQ55 1244 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 STAG2Q8N3U4 1231 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 PHKBQ93100 1093 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 MAD2L2Q9UI95 211 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 FEM1BQ9UK73 627 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 SLC45A1Q9Y2W3 748 aa20.61■□□□□ 0.89
RBFOX1-222ENST00000585867 PALM3A6NDB9 673 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 FLOT1O75955 427 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 IRX3P78415 501 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 NBR1Q14596 966 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 NBPF11Q86T75 865 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 CHURC1Q8WUH1 139 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 FBXO28Q9NVF7 368 aa20.6■□□□□ 0.89
RBFOX1-222ENST00000585867 MYH15Q9Y2K3 1946 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 PRPF3O43395 683 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 SLC16A2P36021 539 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 STAT2P52630 851 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 COG2Q14746 738 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 SAMD1Q6SPF0 538 aaPredicted RBP20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 P2RX7Q99572 595 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 ZCCHC17Q9NP64 241 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 PNMA3Q9UL41 463 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 KLRF2D3W0D1 207 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms