RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 CLIP2Q9UDT6 1046 aa31.7■■■□□ 2.67
PTBP1-206ENST00000585856 SYNGAP1Q96PV0 1343 aa31.7■■■□□ 2.66
PTBP1-206ENST00000585856 TSHZ3Q63HK5 1081 aa31.69■■■□□ 2.66
PTBP1-206ENST00000585856 MKL1Q969V6 931 aa31.69■■■□□ 2.66
PTBP1-206ENST00000585856 DDX11Q96FC9 970 aa31.69■■■□□ 2.66
PTBP1-206ENST00000585856 CTDP1Q9Y5B0 961 aaPredicted RBP31.69■■■□□ 2.66
PTBP1-206ENST00000585856 TTC41PQ6P2S7 1318 aa31.69■■■□□ 2.66
PTBP1-206ENST00000585856 PATL2C9JE40 543 aaKnown RBP31.68■■■□□ 2.66
PTBP1-206ENST00000585856 ZBED4O75132 1171 aa31.68■■■□□ 2.66
PTBP1-206ENST00000585856 TAL1P17542 331 aaPredicted RBP31.68■■■□□ 2.66
PTBP1-206ENST00000585856 MAMDC4Q6UXC1 1216 aa31.68■■■□□ 2.66
PTBP1-206ENST00000585856 BADQ92934 168 aa31.68■■■□□ 2.66
PTBP1-206ENST00000585856 TACC3Q9Y6A5 838 aa31.68■■■□□ 2.66
PTBP1-206ENST00000585856 ERC2O15083 957 aa31.67■■■□□ 2.66
PTBP1-206ENST00000585856 PGK1P00558 417 aa31.67■■■□□ 2.66
PTBP1-206ENST00000585856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.67■■■□□ 2.664e-6■□□□□ 9.1
PTBP1-206ENST00000585856 CEP95Q96GE4 821 aa31.67■■■□□ 2.66
PTBP1-206ENST00000585856 TSEN34Q9BSV6 310 aaKnown RBP31.67■■■□□ 2.66
PTBP1-206ENST00000585856 NACAP1Q9BZK3 213 aa31.67■■■□□ 2.66
PTBP1-206ENST00000585856 MTMR4Q9NYA4 1195 aa31.67■■■□□ 2.66
PTBP1-206ENST00000585856 DNAJC25-GNG10A0A024R161 153 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 M0R2C6 588 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 TTLL1O95922 423 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 TLE2Q04725 743 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 ZNF467Q7Z7K2 595 aaPredicted RBP31.66■■■□□ 2.66
PTBP1-206ENST00000585856 IFNL3Q8IZI9 196 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 GMCL1P1Q8NEA9 526 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 FEM1BQ9UK73 627 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 RIPK3Q9Y572 518 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 PLIN4Q96Q06 1357 aa31.66■■■□□ 2.66
PTBP1-206ENST00000585856 MCM3APO60318 1980 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 A0A1W2PQ45 241 aaPredicted RBP31.65■■■□□ 2.66
PTBP1-206ENST00000585856 A0A1W2PQY0 241 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 CLTBP09497 229 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 SHHQ15465 462 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 ZNF697Q5TEC3 545 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 SLC38A10Q9HBR0 1119 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 FBXO40Q9UH90 709 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 FAM184BQ9ULE4 1060 aa31.65■■■□□ 2.66
PTBP1-206ENST00000585856 LAMA2P24043 3122 aaKnown RBP31.64■■■□□ 2.66
PTBP1-206ENST00000585856 TRIM43BA6NCK2 446 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 ADAMTS4O75173 837 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 PRDM1O75626 825 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 SLC3A2P08195 630 aaKnown RBP31.64■■■□□ 2.66
PTBP1-206ENST00000585856 OAZ1P54368 228 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 PDE4BQ07343 736 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 SH3RF1Q7Z6J0 888 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 CPXCR1Q8N123 301 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 KIFC2Q96AC6 838 aa31.64■■■□□ 2.66
PTBP1-206ENST00000585856 TRIM43Q96BQ3 446 aaPredicted RBP31.64■■■□□ 2.66
PTBP1-206ENST00000585856 FDX1P10109 184 aa31.63■■■□□ 2.65
PTBP1-206ENST00000585856 NUP133Q8WUM0 1156 aa31.63■■■□□ 2.65
PTBP1-206ENST00000585856 SNAI1O95863 264 aaPredicted RBP31.62■■■□□ 2.65
PTBP1-206ENST00000585856 TSPY3P0CV98 308 aa31.62■■■□□ 2.65
PTBP1-206ENST00000585856 TSPY8P0CW00 308 aa31.62■■■□□ 2.65
PTBP1-206ENST00000585856 CHST13Q8NET6 341 aa31.62■■■□□ 2.65
PTBP1-206ENST00000585856 NEDD1Q8NHV4 660 aa31.62■■■□□ 2.65
PTBP1-206ENST00000585856 GUCD1Q96NT3 240 aa31.62■■■□□ 2.65
PTBP1-206ENST00000585856 SYNRGQ9UMZ2 1314 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 MOXD2PA6NHM9 499 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 C9orf50Q5SZB4 431 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 ANKRD35Q8N283 1001 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 TOX2Q96NM4 488 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 NAPBQ9H115 298 aa31.61■■■□□ 2.65
PTBP1-206ENST00000585856 RAVER2Q9HCJ3 691 aaKnown RBP31.61■■■□□ 2.65
PTBP1-206ENST00000585856 ZHX1Q9UKY1 873 aaPredicted RBP31.61■■■□□ 2.65
PTBP1-206ENST00000585856 KIAA0355O15063 1070 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 DUSP11O75319 330 aaKnown RBP31.6■■■□□ 2.65
PTBP1-206ENST00000585856 BMP3P12645 472 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 SLC4A3P48751 1232 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 ACLYP53396 1101 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 PPP4R3BQ5MIZ7 849 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 LRRC47Q8N1G4 583 aaKnown RBP31.6■■■□□ 2.65
PTBP1-206ENST00000585856 PI4K2BQ8TCG2 481 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 LENG1Q96BZ8 264 aaPredicted RBP31.6■■■□□ 2.65
PTBP1-206ENST00000585856 FSD1Q9BTV5 496 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 ABHD16BQ9H3Z7 469 aa31.6■■■□□ 2.65
PTBP1-206ENST00000585856 SMAD3P84022 425 aaKnown RBP31.59■■■□□ 2.65
PTBP1-206ENST00000585856 ANKRD33Q7Z3H0 272 aa31.59■■■□□ 2.65
PTBP1-206ENST00000585856 KLHDC9Q8NEP7 349 aa31.59■■■□□ 2.65
PTBP1-206ENST00000585856 STARD7Q9NQZ5 370 aa31.59■■■□□ 2.65
PTBP1-206ENST00000585856 PQBP1O60828 265 aaKnown RBP31.58■■■□□ 2.65
PTBP1-206ENST00000585856 RAG1P15918 1043 aa31.58■■■□□ 2.65
PTBP1-206ENST00000585856 ACVR2BQ13705 512 aa31.58■■■□□ 2.65
PTBP1-206ENST00000585856 ZMYM1Q5SVZ6 1142 aa31.58■■■□□ 2.65
PTBP1-206ENST00000585856 SLFN13Q68D06 897 aa31.58■■■□□ 2.65
PTBP1-206ENST00000585856 FAM161BQ96MY7 647 aa31.58■■■□□ 2.65
PTBP1-206ENST00000585856 SEC62Q99442 399 aaKnown RBP31.58■■■□□ 2.65
PTBP1-206ENST00000585856 CST5P28325 142 aaPredicted RBP31.57■■■□□ 2.64
PTBP1-206ENST00000585856 STAT2P52630 851 aa31.57■■■□□ 2.64
PTBP1-206ENST00000585856 PPARAQ07869 468 aa31.57■■■□□ 2.64
PTBP1-206ENST00000585856 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.57■■■□□ 2.64
PTBP1-206ENST00000585856 DCDC2CA8MYV0 355 aa31.56■■■□□ 2.64
PTBP1-206ENST00000585856 TFAP4Q01664 338 aa31.56■■■□□ 2.64
PTBP1-206ENST00000585856 CCSAPQ6IQ19 270 aaPredicted RBP31.56■■■□□ 2.64
PTBP1-206ENST00000585856 FAM160B2Q86V87 743 aa31.56■■■□□ 2.64
PTBP1-206ENST00000585856 PCSK9Q8NBP7 692 aaKnown RBP31.56■■■□□ 2.64
PTBP1-206ENST00000585856 CHURC1Q8WUH1 139 aa31.56■■■□□ 2.64
PTBP1-206ENST00000585856 SPC25Q9HBM1 224 aa31.56■■■□□ 2.64
PTBP1-206ENST00000585856 TMEM39AQ9NV64 488 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms