RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 RBM28Q9NW13 759 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 RABGAP1Q9Y3P9 1069 aa16.99■□□□□ 0.31
SCAMP4-209ENST00000585335 KLRF2D3W0D1 207 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.314e-7■■□□□ 12
SCAMP4-209ENST00000585335 TOB2Q14106 344 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 RTN1Q16799 776 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 RASGRP2Q7LDG7 609 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 FANCBQ8NB91 859 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 ATG4CQ96DT6 458 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 KIF2CQ99661 725 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
SCAMP4-209ENST00000585335 PALM3A6NDB9 673 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 SLC16A2P36021 539 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 AK2P54819 239 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 EVCP57679 992 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 CCNA1P78396 465 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 FAM110CQ1W6H9 321 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 ZNF274Q96GC6 653 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 CPA4Q9UI42 421 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
SCAMP4-209ENST00000585335 ADGRA2Q96PE1 1338 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 VWA5AO00534 786 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 HSPA1AP0DMV8 641 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 HSPA1BP0DMV9 641 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 RXRAP19793 462 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 KIF22Q14807 665 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 TTBK2Q6IQ55 1244 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 RAB11FIP4Q86YS3 637 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
SCAMP4-209ENST00000585335 BCRP11274 1271 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 PDIA3P30101 505 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 COPB2P35606 906 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 OAZ1P54368 228 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 ERVK-24P63145 666 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 PLS1Q14651 629 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 C17orf99Q6UX52 265 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 STAG2Q8N3U4 1231 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 UBA5Q9GZZ9 404 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 ADAMTS5Q9UNA0 930 aa16.95■□□□□ 0.3
SCAMP4-209ENST00000585335 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 NID2Q14112 1375 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 GPR25O00155 361 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 MCM2P49736 904 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 SP3Q02447 781 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 TRAF1Q13077 416 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 TEX13BQ9BXU2 312 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
SCAMP4-209ENST00000585335 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 CPLX1O14810 134 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 FKTNO75072 461 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 SLC25A27O95847 323 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 STK3Q13188 491 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 CCDC174Q6PII3 467 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 TMTC3Q6ZXV5 915 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 CPXCR1Q8N123 301 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 LARP6Q9BRS8 491 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 SPATC1LQ9H0A9 340 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 VAT1LQ9HCJ6 419 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 BTBD7Q9P203 1132 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 TSKSQ9UJT2 592 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 RLFQ13129 1914 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
SCAMP4-209ENST00000585335 ATP2A1O14983 1001 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 CDKL5O76039 1030 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 MAPK4P31152 587 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 STAT3P40763 770 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 TMEM132BQ14DG7 1078 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 CDC37Q16543 378 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
SCAMP4-209ENST00000585335 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms