RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 CPLX2Q6PUV4 134 aaKnown RBP15.86■□□□□ 0.13
ITGB4-209ENST00000583327 ADGRF4Q8IZF3 695 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
ITGB4-209ENST00000583327 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 CPVLQ9H3G5 476 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 AGTPBP1Q9UPW5 1226 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 SLC45A1Q9Y2W3 748 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 MYPNQ86TC9 1320 aa15.86■□□□□ 0.13
ITGB4-209ENST00000583327 PTPDC1A2A3K4 754 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 CPLX1O14810 134 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 DDIT3P35638 169 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 SLC16A2P36021 539 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 STAT2P52630 851 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 HMGN5P82970 282 aaKnown RBP15.85■□□□□ 0.13
ITGB4-209ENST00000583327 SYDE2Q5VT97 1194 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 RGS22Q8NE09 1264 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 PHKBQ93100 1093 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 PTPN18Q99952 460 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 PRR12Q9ULL5 1215 aa15.85■□□□□ 0.13
ITGB4-209ENST00000583327 ABT1Q9ULW3 272 aaKnown RBP15.85■□□□□ 0.13
ITGB4-209ENST00000583327 V9GY48 417 aaPredicted RBP15.85■□□□□ 0.13
ITGB4-209ENST00000583327 MANSC4A6NHS7 340 aaPredicted RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 RAD21O60216 631 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 DTNBO60941 627 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 FDX1P10109 184 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 INHBEP58166 350 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 COG2Q14746 738 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 DEFB115Q30KQ5 88 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 LBX2Q6XYB7 198 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 ANKRD23Q86SG2 305 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 RANBP17Q9H2T7 1088 aaKnown RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 CWC22Q9HCG8 908 aaKnown RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 ORC3Q9UBD5 711 aaPredicted RBP15.84■□□□□ 0.13
ITGB4-209ENST00000583327 PPP1R9AQ9ULJ8 1098 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 RLFQ13129 1914 aa15.84■□□□□ 0.13
ITGB4-209ENST00000583327 BTBD19C9JJ37 291 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 DEXIO95424 95 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 DSG3P32926 999 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 TM4SF4P48230 202 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 PFKFB3Q16875 520 aaPredicted RBP15.83■□□□□ 0.12
ITGB4-209ENST00000583327 GADL1Q6ZQY3 521 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 REPS2Q8NFH8 660 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 SLF1Q9BQI6 1058 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 SLC26A6Q9BXS9 759 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 ZCCHC17Q9NP64 241 aaKnown RBP15.83■□□□□ 0.12
ITGB4-209ENST00000583327 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
ITGB4-209ENST00000583327 CCL15-CCL14A0A0B4J2E2 113 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 PNMA6FA0A0J9YX94 578 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 ZBTB5O15062 677 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 GJB2P29033 226 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 CCL15Q16663 113 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 PIGSQ96S52 555 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 SLC38A10Q9HBR0 1119 aa15.82■□□□□ 0.12
ITGB4-209ENST00000583327 VWA5AO00534 786 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 ATP2A1O14983 1001 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 ZNF536O15090 1300 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 PPFIA3O75145 1194 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 FLOT1O75955 427 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 MKRN3Q13064 507 aaKnown RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 PABPC4Q13310 644 aaKnown RBP eCLIP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 CYP4F22Q6NT55 531 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 FAM177A1Q8N128 213 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 RRP36Q96EU6 259 aaKnown RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 DDX11Q96FC9 970 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 P2RX7Q99572 595 aaKnown RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-209ENST00000583327 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
ITGB4-209ENST00000583327 PARP14Q460N5 1801 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 SPDYE16A6NNV3 312 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-209ENST00000583327 SCG2P13521 617 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 CDC37Q16543 378 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-209ENST00000583327 QRICH1Q2TAL8 776 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 FAM43AQ8N2R8 423 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 WASF1Q92558 559 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 AIFM3Q96NN9 605 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 ZIC5Q96T25 663 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 SH3GLB2Q9NR46 395 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
ITGB4-209ENST00000583327 PDHXO00330 501 aa15.79■□□□□ 0.12
ITGB4-209ENST00000583327 IGF2BP3O00425 579 aaKnown RBP eCLIP15.79■□□□□ 0.12
ITGB4-209ENST00000583327 OSBPP22059 807 aa15.79■□□□□ 0.12
ITGB4-209ENST00000583327 OAZ1P54368 228 aa15.79■□□□□ 0.12
ITGB4-209ENST00000583327 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
ITGB4-209ENST00000583327 NOGQ13253 232 aa15.79■□□□□ 0.12
ITGB4-209ENST00000583327 REM2Q8IYK8 340 aaPredicted RBP15.79■□□□□ 0.12
ITGB4-209ENST00000583327 CAPNS2Q96L46 248 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms