RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 NUP160Q12769 1436 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 ANKRD39Q53RE8 183 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 HEATR6Q6AI08 1181 aaKnown RBP11.05□□□□□ -0.64
CDH8-207ENST00000582242 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 ARMC10Q8N2F6 343 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 ZSWIM2Q8NEG5 633 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 UTP4Q969X6 686 aaKnown RBP11.05□□□□□ -0.64
CDH8-207ENST00000582242 MEGF10Q96KG7 1140 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
CDH8-207ENST00000582242 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 MKRN2Q9H000 416 aaKnown RBP11.05□□□□□ -0.64
CDH8-207ENST00000582242 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 FAM86C1Q9NVL1 165 aa11.05□□□□□ -0.64
CDH8-207ENST00000582242 DYNC1LI2O43237 492 aaPredicted RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 BMP3P12645 472 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 MAP4P27816 1152 aaKnown RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 DDX10Q13206 875 aaKnown RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 ZC3H12BQ5HYM0 836 aaKnown RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 FAM20CQ8IXL6 584 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 APBA2Q99767 749 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 KDM6BO15054 1643 aa11.04□□□□□ -0.64
CDH8-207ENST00000582242 POLR1AO95602 1720 aaPredicted RBP11.04□□□□□ -0.64
CDH8-207ENST00000582242 KIF14Q15058 1648 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 DYRK3O43781 588 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 SV2CQ496J9 727 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 TMEM67Q5HYA8 995 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 SYNPOQ8N3V7 929 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 FBXL18Q96ME1 805 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
CDH8-207ENST00000582242 ABCC5O15440 1437 aa11.02□□□□□ -0.64
CDH8-207ENST00000582242 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
CDH8-207ENST00000582242 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 SHOXO15266 292 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 RXRBP28702 533 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 ZNF513Q8N8E2 541 aaPredicted RBP11.02□□□□□ -0.65
CDH8-207ENST00000582242 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 FEZ1Q99689 392 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 GBP3Q9H0R5 595 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 C1GALT1Q9NS00 363 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
CDH8-207ENST00000582242 DENND4BO75064 1496 aaPredicted RBP11.01□□□□□ -0.65
CDH8-207ENST00000582242 AUHQ13825 339 aaKnown RBP11.01□□□□□ -0.65
CDH8-207ENST00000582242 RNF187Q5TA31 235 aaPredicted RBP11.01□□□□□ -0.65
CDH8-207ENST00000582242 CDH24Q86UP0 819 aa11.01□□□□□ -0.65
CDH8-207ENST00000582242 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
CDH8-207ENST00000582242 SLKQ9H2G2 1235 aaPredicted RBP11.01□□□□□ -0.65
CDH8-207ENST00000582242 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
CDH8-207ENST00000582242 ABCA8O94911 1581 aa11.01□□□□□ -0.65
CDH8-207ENST00000582242 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
CDH8-207ENST00000582242 A0A1W2PQU0 124 aa11□□□□□ -0.65
CDH8-207ENST00000582242 CD247P20963 164 aa11□□□□□ -0.65
CDH8-207ENST00000582242 CDK5R2Q13319 367 aa11□□□□□ -0.65
CDH8-207ENST00000582242 TCEA2Q15560 299 aa11□□□□□ -0.65
CDH8-207ENST00000582242 KRTAP4-8Q9BYQ9 185 aa11□□□□□ -0.65
CDH8-207ENST00000582242 WHRNQ9P202 907 aa11□□□□□ -0.65
CDH8-207ENST00000582242 APEX2Q9UBZ4 518 aa11□□□□□ -0.65
CDH8-207ENST00000582242 PRKAB1Q9Y478 270 aa11□□□□□ -0.65
CDH8-207ENST00000582242 ZNF451Q9Y4E5 1061 aa11□□□□□ -0.65
CDH8-207ENST00000582242 TKFCQ3LXA3 575 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 PAOXQ6QHF9 649 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 TOP6BLQ8N6T0 577 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 FGD4Q96M96 766 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
CDH8-207ENST00000582242 ARHGEF4Q9NR80 690 aa10.99□□□□□ -0.65
CDH8-207ENST00000582242 CCDC163A0A0D9SF12 145 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 EOMESO95936 686 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 ANKRD13AQ8IZ07 590 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 COX4I2Q96KJ9 171 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 DUSP23Q9BVJ7 150 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
CDH8-207ENST00000582242 GP6Q9HCN6 339 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
CDH8-207ENST00000582242 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
CDH8-207ENST00000582242 DHX15O43143 795 aaKnown RBP10.97□□□□□ -0.65
CDH8-207ENST00000582242 PPM1BO75688 479 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 CYP7A1P22680 504 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 NFKBIBQ15653 356 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 NBPF9Q3BBW0 867 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 BEND4Q6ZU67 534 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 ZNF227Q86WZ6 799 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 GIMAP7Q8NHV1 300 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 RCC1LQ96I51 464 aaKnown RBP10.97□□□□□ -0.65
CDH8-207ENST00000582242 KCNF1Q9H3M0 494 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 LRP2BPQ9P2M1 347 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 PCDHB12Q9Y5F1 795 aa10.97□□□□□ -0.65
CDH8-207ENST00000582242 TEX14Q8IWB6 1497 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms