RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
GGA3-211ENST00000582232 MYH6P13533 1939 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CPLX1O14810 134 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CYTH3O43739 400 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CDKL5O76039 1030 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CTDNEP1O95476 244 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 FDX1P10109 184 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 TM4SF4P48230 202 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 COG2Q14746 738 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CYP4F22Q6NT55 531 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 LBX2Q6XYB7 198 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 NBPF11Q86T75 865 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CCDC83Q8IWF9 413 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
GGA3-211ENST00000582232 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 ADAMTS5Q9UNA0 930 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
GGA3-211ENST00000582232 BTBD19C9JJ37 291 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 DSG3P32926 999 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 SREBF2Q12772 1141 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
GGA3-211ENST00000582232 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
GGA3-211ENST00000582232 PTPN18Q99952 460 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
GGA3-211ENST00000582232 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
GGA3-211ENST00000582232 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
GGA3-211ENST00000582232 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
GGA3-211ENST00000582232 FLOT1O75955 427 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
GGA3-211ENST00000582232 MAP2K2P36507 400 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 JMJD4Q9H9V9 463 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 FBXO28Q9NVF7 368 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
GGA3-211ENST00000582232 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
GGA3-211ENST00000582232 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
GGA3-211ENST00000582232 PDHXO00330 501 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 OSBPP22059 807 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 SLC16A2P36021 539 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 SSRP1Q08945 709 aaKnown RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 TRIM22Q8IYM9 498 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 CMTR1Q8N1G2 835 aaKnown RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 MB21D1Q8N884 522 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 GTF3C2Q8WUA4 911 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 ASCC2Q9H1I8 757 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
GGA3-211ENST00000582232 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
GGA3-211ENST00000582232 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 IGF2BP3O00425 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
GGA3-211ENST00000582232 VWA5AO00534 786 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 ATP2A1O14983 1001 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 ZBTB5O15062 677 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 DEXIO95424 95 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 FDPSP14324 419 aaKnown RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 VEGFBP49765 207 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 IRX3P78415 501 aaPredicted RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 CCDC82Q8N4S0 544 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 PHKBQ93100 1093 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 RRP36Q96EU6 259 aaKnown RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 P2RX7Q99572 595 aaKnown RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 PNMA2Q9UL42 364 aa13.33□□□□□ -0.28
GGA3-211ENST00000582232 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
GGA3-211ENST00000582232 hCG_1984214I3L0E3 225 aa13.32□□□□□ -0.28
GGA3-211ENST00000582232 OAZ1P54368 228 aa13.32□□□□□ -0.28
GGA3-211ENST00000582232 HERVK_113P62684 666 aa13.32□□□□□ -0.28
GGA3-211ENST00000582232 AKAP17AQ02040 695 aaKnown RBP13.32□□□□□ -0.28
GGA3-211ENST00000582232 PKN1Q16512 942 aa13.32□□□□□ -0.28
GGA3-211ENST00000582232 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
GGA3-211ENST00000582232 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
GGA3-211ENST00000582232 ZNF713Q8N859 430 aaPredicted RBP13.32□□□□□ -0.28
GGA3-211ENST00000582232 RGS22Q8NE09 1264 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms