RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 FOXN1O15353 648 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 MICU3Q86XE3 530 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 NUP133Q8WUM0 1156 aa18.61■□□□□ 0.57
CCDC57-213ENST00000581625 VWA5AO00534 786 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 ZBTB43O43298 467 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 HSPA8P11142 646 aaKnown RBP18.6■□□□□ 0.57
CCDC57-213ENST00000581625 GNAQP50148 359 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 EVCP57679 992 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 TOB2Q14106 344 aaPredicted RBP18.6■□□□□ 0.57
CCDC57-213ENST00000581625 RABEP1Q15276 862 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 CHMP4CQ96CF2 233 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 KIF2CQ99661 725 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 GPCPD1Q9NPB8 672 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 MAD2L2Q9UI95 211 aa18.6■□□□□ 0.57
CCDC57-213ENST00000581625 CTDP1Q9Y5B0 961 aaPredicted RBP18.6■□□□□ 0.57
CCDC57-213ENST00000581625 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
CCDC57-213ENST00000581625 GOLGA8BA8MQT2 603 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 KLRF2D3W0D1 207 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 ZBED4O75132 1171 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 NEK4P51957 841 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 OAZ1P54368 228 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 ERVK-24P63145 666 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 CCNA1P78396 465 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 SP3Q02447 781 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 APOBRQ0VD83 1088 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
CCDC57-213ENST00000581625 SLC38A10Q9HBR0 1119 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 RBM28Q9NW13 759 aaKnown RBP18.59■□□□□ 0.57
CCDC57-213ENST00000581625 RBPJLQ9UBG7 517 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 TSKSQ9UJT2 592 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 BRPF3Q9ULD4 1205 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 PRR12Q9ULL5 1215 aa18.59■□□□□ 0.57
CCDC57-213ENST00000581625 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 ATP2A1O14983 1001 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 FKTNO75072 461 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 COPB2P35606 906 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 TTBK2Q6IQ55 1244 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 LZTS2Q9BRK4 669 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 TXNRD2Q9NNW7 524 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 PNMA2Q9UL42 364 aa18.58■□□□□ 0.56
CCDC57-213ENST00000581625 CCDC196A0A1B0GTZ2 297 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 CNMDO75829 334 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 SLC16A2P36021 539 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 METAP2P50579 478 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 KIF22Q14807 665 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 RTN1Q16799 776 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 POTEEQ6S8J3 1075 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 STAG2Q8N3U4 1231 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 FANCBQ8NB91 859 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 REPS2Q8NFH8 660 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 ZNF296Q8WUU4 475 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 ZNF274Q96GC6 653 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 SPATC1LQ9H0A9 340 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 RANBP17Q9H2T7 1088 aaKnown RBP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 BTBD7Q9P203 1132 aa18.57■□□□□ 0.56
CCDC57-213ENST00000581625 ZNF214Q9UL59 606 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
CCDC57-213ENST00000581625 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
CCDC57-213ENST00000581625 RXRAP19793 462 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 AK2P54819 239 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
CCDC57-213ENST00000581625 TMEM132BQ14DG7 1078 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 ARHGEF6Q15052 776 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 SHCBP1Q8NEM2 672 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 SPZ1Q9BXG8 430 aa18.56■□□□□ 0.56
CCDC57-213ENST00000581625 ST18O60284 1047 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 SLC25A27O95847 323 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 MAPK4P31152 587 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 ADGRF4Q8IZF3 695 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
CCDC57-213ENST00000581625 COL11A1P12107 1806 aaPredicted RBP18.55■□□□□ 0.56
CCDC57-213ENST00000581625 GNRH1P01148 92 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 ICAM1P05362 532 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 PDIA3P30101 505 aaKnown RBP18.54■□□□□ 0.56
CCDC57-213ENST00000581625 STAT3P40763 770 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 LBX1P52954 281 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 FCGRTP55899 365 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 PLS1Q14651 629 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 CDC37Q16543 378 aaPredicted RBP18.54■□□□□ 0.56
CCDC57-213ENST00000581625 RAB11FIP4Q86YS3 637 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 RIOX2Q8IUF8 465 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 CCAR1Q8IX12 1150 aaKnown RBP18.54■□□□□ 0.56
CCDC57-213ENST00000581625 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 HPS5Q9UPZ3 1129 aa18.54■□□□□ 0.56
CCDC57-213ENST00000581625 TRAF1Q13077 416 aa18.53■□□□□ 0.56
CCDC57-213ENST00000581625 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms