RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 ZFYVE27Q5T4F4 411 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 LINC00116Q8NCU8 138 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 REV1Q9UBZ9 1251 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 KLHL3Q9UH77 587 aa5.95□□□□□ -1.46
SMG8-205ENST00000580798 SSU72P8A0A1W2PR75 194 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 FKTNO75072 461 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 CAP1Q01518 475 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 RAB3GAP1Q15042 981 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 HSF5Q4G112 596 aaPredicted RBP5.94□□□□□ -1.46
SMG8-205ENST00000580798 BNC2Q6ZN30 1099 aaPredicted RBP5.94□□□□□ -1.46
SMG8-205ENST00000580798 SND1Q7KZF4 910 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMG8-205ENST00000580798 ZNF655Q8N720 491 aaPredicted RBP5.94□□□□□ -1.46
SMG8-205ENST00000580798 KIF2CQ99661 725 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 PARP2Q9UGN5 583 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 CNOT11Q9UKZ1 510 aaKnown RBP5.94□□□□□ -1.46
SMG8-205ENST00000580798 PRR36Q9H6K5 1346 aa5.94□□□□□ -1.46
SMG8-205ENST00000580798 FAM221AA4D161 298 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 FADS2P1A8MWK0 482 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 NUDT19A8MXV4 375 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 F6X3S4 739 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 K7ESM1 405 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 DNAJA2O60884 412 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 SYPP08247 313 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 ARL4AP40617 200 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 ST13P50502 369 aaKnown RBP5.93□□□□□ -1.46
SMG8-205ENST00000580798 DAB2P98082 770 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 PSMD2Q13200 908 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 GALNT18Q6P9A2 607 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 TMC3Q7Z5M5 1100 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 PHACTR4Q8IZ21 702 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 FAM161BQ96MY7 647 aa5.93□□□□□ -1.46
SMG8-205ENST00000580798 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
SMG8-205ENST00000580798 SUV39H1O43463 412 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 CTSHP09668 335 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 RLBP1P12271 317 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 TNFRSF1AP19438 455 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 IGFBP6P24592 240 aaPredicted RBP5.92□□□□□ -1.46
SMG8-205ENST00000580798 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 LAPTM5Q13571 262 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 TAF1CQ15572 869 aaPredicted RBP5.92□□□□□ -1.46
SMG8-205ENST00000580798 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
SMG8-205ENST00000580798 FCRL2Q96LA5 508 aaPredicted RBP5.92□□□□□ -1.46
SMG8-205ENST00000580798 CHMP4AQ9BY43 222 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 TNFRSF10DQ9UBN6 386 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 PALD1Q9ULE6 856 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 GPR55Q9Y2T6 319 aaPredicted RBP5.92□□□□□ -1.46
SMG8-205ENST00000580798 TAF6LQ9Y6J9 622 aa5.92□□□□□ -1.46
SMG8-205ENST00000580798 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
SMG8-205ENST00000580798 BPNT1O95861 308 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 PRKCAP17252 672 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 GBP1P32455 592 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 LIMS1P48059 325 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 ZXDAP98168 799 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 SNW1Q13573 536 aaKnown RBP5.91□□□□□ -1.46
SMG8-205ENST00000580798 CBX2Q14781 532 aaPredicted RBP5.91□□□□□ -1.46
SMG8-205ENST00000580798 ZNF827Q17R98 1081 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 FERMT3Q86UX7 667 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 POLR3KQ9Y2Y1 108 aaPredicted RBP5.91□□□□□ -1.46
SMG8-205ENST00000580798 IRS2Q9Y4H2 1338 aa5.91□□□□□ -1.46
SMG8-205ENST00000580798 GRIN3BO60391 1043 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 HTR3BO95264 441 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.46
SMG8-205ENST00000580798 CEBPAP49715 358 aaPredicted RBP5.9□□□□□ -1.46
SMG8-205ENST00000580798 CYP4F8P98187 520 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 NBPF9Q3BBW0 867 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 VWA3BQ502W6 1294 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 DNAJC14Q6Y2X3 702 aaPredicted RBP5.9□□□□□ -1.46
SMG8-205ENST00000580798 TMC4Q7Z404 712 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 SLCO6A1Q86UG4 719 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 ADGRG2Q8IZP9 1017 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 GATAD2BQ8WXI9 593 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 CRELD1Q96HD1 420 aa5.9□□□□□ -1.46
SMG8-205ENST00000580798 A0A1B0GTL3 188 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 RGS13O14921 159 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 PRAMEF1O95521 474 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 F13A1P00488 732 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 PF4P02776 101 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 CHMP4BP1P59074 171 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 XPCQ01831 940 aaPredicted RBP5.89□□□□□ -1.47
SMG8-205ENST00000580798 CAMK2GQ13555 558 aaPredicted RBP5.89□□□□□ -1.47
SMG8-205ENST00000580798 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
SMG8-205ENST00000580798 NT5DC1Q5TFE4 455 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 DIEXFQ68CQ4 756 aaKnown RBP5.89□□□□□ -1.47
SMG8-205ENST00000580798 FBXO33Q7Z6M2 555 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 NLGN1Q8N2Q7 840 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 NUP43Q8NFH3 380 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 ACSL6Q9UKU0 697 aa5.89□□□□□ -1.47
SMG8-205ENST00000580798 MATN3O15232 486 aa5.88□□□□□ -1.47
SMG8-205ENST00000580798 UBOX5O94941 541 aa5.88□□□□□ -1.47
SMG8-205ENST00000580798 RNF4P78317 190 aa5.88□□□□□ -1.47
SMG8-205ENST00000580798 ADAM17P78536 824 aa5.88□□□□□ -1.47
SMG8-205ENST00000580798 ZNF200P98182 395 aaPredicted RBP5.88□□□□□ -1.47
SMG8-205ENST00000580798 LMNB2Q03252 620 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms