RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 STAT2P52630 851 aa15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 RESTQ13127 1097 aa15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 HEATR3Q7Z4Q2 680 aa15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 GPKOWQ92917 476 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 ZSCAN16Q9H4T2 348 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 AFG3L2Q9Y4W6 797 aa15.97■□□□□ 0.15
CDK5RAP3-219ENST00000580670 WDR46O15213 610 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 MMP1P03956 469 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 DGKZQ13574 1117 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 SYDE2Q5VT97 1194 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 BTNL9Q6UXG8 535 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 SHISA4Q96DD7 197 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 CLMNQ96JQ2 1002 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 EMILIN3Q9NT22 766 aa15.96■□□□□ 0.15
CDK5RAP3-219ENST00000580670 PNMA6FA0A0J9YX94 578 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 KIF23Q02241 960 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CHURC1Q8WUH1 139 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 MTMR8Q96EF0 704 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CHAMP1Q96JM3 812 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SH3GLB2Q9NR46 395 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 STXBP3O00186 592 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 ZBTB5O15062 677 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 HMGCS2P54868 508 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FAM160B2Q86V87 743 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PHF20Q9BVI0 1012 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 BARHL2Q9NY43 387 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FEM1BQ9UK73 627 aa15.95■□□□□ 0.14
CDK5RAP3-219ENST00000580670 KIF28PB7ZC32 967 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PLA2G6O60733 806 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CELF2O95319 508 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 VCAM1P19320 739 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NLRP5P59047 1200 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CDC37Q16543 378 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 LDLRAD1Q5T700 205 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 ERO1BQ86YB8 467 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 DIS3L2Q8IYB7 885 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PRR12Q9ULL5 1215 aa15.94■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NAPAP54920 295 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PPATQ06203 517 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 QRICH1Q2TAL8 776 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FAM43AQ8N2R8 423 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 KIFC2Q96AC6 838 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 OTUD5Q96G74 571 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 C12orf42Q96LP6 360 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 TANGO6Q9C0B7 1094 aa15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 RPAP3Q9H6T3 665 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 GBA2Q9HCG7 927 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SPDYE5A6NIY4 337 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 BTBD18B2RXH4 712 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 hCG_1984214I3L0E3 225 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 KRT2P35908 639 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SNAP25P60880 206 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FKBP1BP68106 108 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 ZNF713Q8N859 430 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CCDC12Q8WUD4 166 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 BRMS1Q9HCU9 246 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FBXO28Q9NVF7 368 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PPP1R11O60927 126 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 ITGBL1O95965 494 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 U2AF2P26368 475 aaKnown RBP eCLIP15.92■□□□□ 0.146e-7■■■□□ 18.2
CDK5RAP3-219ENST00000580670 CALML3P27482 149 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 MCM4P33991 863 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FAM177A1Q8N128 213 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 C2orf69Q8N8R5 385 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 OXER1Q8TDS5 423 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 COA7Q96BR5 231 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 OPTNQ96CV9 577 aa15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FOXP1Q9H334 677 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-219ENST00000580670 UNCXA6NJT0 531 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 IRF6O14896 467 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PRKCSHP14314 528 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NR5A1Q13285 461 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PPIL2Q13356 520 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NPY5RQ15761 445 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SH3D19Q5HYK7 790 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SLC10A4Q96EP9 437 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FLOT1O75955 427 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 NOSTRINQ8IVI9 506 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms