RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 NDUFB10O96000 172 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 IGHA2P01877 340 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 CNGA1P29973 690 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 RRP12Q5JTH9 1297 aaKnown RBP29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 MFSD6Q6ZSS7 791 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 Q7L0L9 218 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 ATG4CQ96DT6 458 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 SENP6Q9GZR1 1112 aaPredicted RBP29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 RAD50Q92878 1312 aa29.37■■■□□ 2.29
CDC42EP4-205ENST00000580315 LRRC47Q8N1G4 583 aaKnown RBP29.36■■■□□ 2.29
CDC42EP4-205ENST00000580315 GMCL1P1Q8NEA9 526 aa29.36■■■□□ 2.29
CDC42EP4-205ENST00000580315 MOV10L1Q9BXT6 1211 aaKnown RBP29.36■■■□□ 2.29
CDC42EP4-205ENST00000580315 CTNNA3Q9UI47 895 aa29.36■■■□□ 2.29
CDC42EP4-205ENST00000580315 STX8Q9UNK0 236 aa29.36■■■□□ 2.29
CDC42EP4-205ENST00000580315 MDM2Q00987 491 aaPredicted RBP29.35■■■□□ 2.29
CDC42EP4-205ENST00000580315 AKNAD1Q5T1N1 836 aa29.35■■■□□ 2.29
CDC42EP4-205ENST00000580315 TRPV1Q8NER1 839 aa29.35■■■□□ 2.29
CDC42EP4-205ENST00000580315 SPATC1LQ9H0A9 340 aa29.35■■■□□ 2.29
CDC42EP4-205ENST00000580315 TACC3Q9Y6A5 838 aa29.35■■■□□ 2.29
CDC42EP4-205ENST00000580315 CHMLP26374 656 aa29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 DPP9Q86TI2 863 aa29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 STAG1Q8WVM7 1258 aa29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 NUP88Q99567 741 aaPredicted RBP29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 FBXO28Q9NVF7 368 aa29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 PPP1R9AQ9ULJ8 1098 aa29.34■■■□□ 2.29
CDC42EP4-205ENST00000580315 DLL1O00548 723 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 STRNO43815 780 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 ADORA2AP29274 412 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 PLS1Q14651 629 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 IMMTQ16891 758 aaKnown RBP29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 SHCBP1Q8NEM2 672 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 CCDC136Q96JN2 1154 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 SLF1Q9BQI6 1058 aa29.33■■■□□ 2.29
CDC42EP4-205ENST00000580315 DNM1LO00429 736 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 CYBAP13498 195 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 NT5C2P49902 561 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 SLFN13Q68D06 897 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 TBC1D10CQ8IV04 446 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 IL17RBQ9NRM6 502 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 ADAMTS5Q9UNA0 930 aa29.32■■■□□ 2.28
CDC42EP4-205ENST00000580315 FRMPD3Q5JV73 1810 aa29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 NMT2O60551 498 aa29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 ERCC3P19447 782 aa29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 ATN1P54259 1190 aaPredicted RBP29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 OLFML2BQ68BL8 750 aa29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 MTMR10Q9NXD2 777 aa29.31■■■□□ 2.28
CDC42EP4-205ENST00000580315 VWA5AO00534 786 aa29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 PRPF38AQ8NAV1 312 aaKnown RBP29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 ESR2Q92731 530 aa29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 MROH8Q9H579 483 aa29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 TCP11L1Q9NUJ3 509 aa29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 FEM1BQ9UK73 627 aa29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 ISY1Q9ULR0 285 aaKnown RBP29.3■■■□□ 2.28
CDC42EP4-205ENST00000580315 LAMA2P24043 3122 aaKnown RBP29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 COBLO75128 1261 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 BMP3P12645 472 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 TMEM132BQ14DG7 1078 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 GMCL1Q96IK5 515 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 IL25Q9H293 177 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 STXBP5LQ9Y2K9 1186 aa29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 CTDP1Q9Y5B0 961 aaPredicted RBP29.29■■■□□ 2.28
CDC42EP4-205ENST00000580315 SLC25A27O95847 323 aa29.28■■■□□ 2.28
CDC42EP4-205ENST00000580315 NCAPG2Q86XI2 1143 aa29.28■■■□□ 2.28
CDC42EP4-205ENST00000580315 LBHD1Q9BQE6 289 aaPredicted RBP29.28■■■□□ 2.28
CDC42EP4-205ENST00000580315 A0A0G2JMZ2 1700 aa29.28■■■□□ 2.28
CDC42EP4-205ENST00000580315 SLC1A4P43007 532 aa29.27■■■□□ 2.28
CDC42EP4-205ENST00000580315 NOVP48745 357 aa29.27■■■□□ 2.28
CDC42EP4-205ENST00000580315 GJC2Q5T442 439 aaPredicted RBP29.27■■■□□ 2.28
CDC42EP4-205ENST00000580315 ARRDC4Q8NCT1 418 aa29.27■■■□□ 2.28
CDC42EP4-205ENST00000580315 RLFQ13129 1914 aa29.27■■■□□ 2.28
CDC42EP4-205ENST00000580315 ZBED4O75132 1171 aa29.26■■■□□ 2.27
CDC42EP4-205ENST00000580315 COPB2P35606 906 aa29.26■■■□□ 2.27
CDC42EP4-205ENST00000580315 STAT3P40763 770 aa29.26■■■□□ 2.27
CDC42EP4-205ENST00000580315 KIFC2Q96AC6 838 aa29.26■■■□□ 2.27
CDC42EP4-205ENST00000580315 ZNF236Q9UL36 1845 aa29.26■■■□□ 2.27
CDC42EP4-205ENST00000580315 NEDD4P46934 1319 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 SGSM2O43147 1006 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 SEPT4O43236 478 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 TOP1P11387 765 aaKnown RBP29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 MCCP23508 829 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 RTP1P59025 263 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 ANO1Q5XXA6 986 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 RIOX2Q8IUF8 465 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 ABRAQ8N0Z2 381 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 TTC14Q96N46 770 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 SLC5A4Q9NY91 659 aa29.25■■■□□ 2.27
CDC42EP4-205ENST00000580315 CUL9Q8IWT3 2517 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 TMEM232C9JQI7 657 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 STAT2P52630 851 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 IKQ13123 557 aaPredicted RBP29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 CCDC178Q5BJE1 867 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 FAM160B2Q86V87 743 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 CHURC1Q8WUH1 139 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 CNNM2Q9H8M5 875 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 PRKAG2Q9UGJ0 569 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 ZNF214Q9UL59 606 aaPredicted RBP29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 MYH4Q9Y623 1939 aa29.24■■■□□ 2.27
CDC42EP4-205ENST00000580315 FDX1P10109 184 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 BMP2KLQ5H9B9 411 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms