RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CCDC96Q2M329 555 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 KIAA1755Q5JYT7 1200 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 LUZP1Q86V48 1076 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 DIS3L2Q8IYB7 885 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 FAM205CA6NFA0 338 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 INPP5BP32019 993 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NT5C2P49902 561 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SNAP25P60880 206 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 DGKZQ13574 1117 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TNFAIP1Q13829 316 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 EARS2Q5JPH6 523 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ZBTB21Q9ULJ3 1066 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SBF1O95248 1867 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 F5H6K3 240 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MMP1P03956 469 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SCG2P13521 617 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 KLRC3Q07444 240 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 PIGSQ96S52 555 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CAP2P40123 477 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 HEATR3Q7Z4Q2 680 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ERCC4Q92889 916 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MAP7D2Q96T17 732 aa14.56□□□□□ -0.08
CDK5RAP3-217ENST00000580287 LMOD1P29536 600 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SF3A1Q15459 793 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 PFKFB3Q16875 520 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 WASF1Q92558 559 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MAP3K14Q99558 947 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NYAP2Q9P242 653 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NDUFB10O96000 172 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SNHG28P0DPA3 235 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SLC1A4P43007 532 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TYRO3Q06418 890 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NPY5RQ15761 445 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 UVSSAQ2YD98 709 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 WWC2Q6AWC2 1192 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TSC1Q92574 1164 aa14.55□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ADM5C9JUS6 153 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TBC1D12O60347 775 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MYSM1Q5VVJ2 828 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 DPY19L2Q6NUT2 758 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CCDC73Q6ZRK6 1079 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MKL1Q969V6 931 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 RCOR1Q9UKL0 485 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 COL2A1P02458 1487 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 USP17L10C9JJH3 530 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TAL1P17542 331 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 GNAQP50148 359 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ADGRF4Q8IZF3 695 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 PHF20Q9BVI0 1012 aa14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ADARB2Q9NS39 739 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NLRP5P59047 1200 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 STK38Q15208 465 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 SASS6Q6UVJ0 657 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 COA7Q96BR5 231 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MRVI1Q9Y6F6 885 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 U2AF2P26368 475 aaKnown RBP eCLIP14.53□□□□□ -0.086e-7■■■□□ 18.2
CDK5RAP3-217ENST00000580287 JMJD4Q9H9V9 463 aa14.53□□□□□ -0.08
CDK5RAP3-217ENST00000580287 WNT7AO00755 349 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MMP14P50281 582 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ANO6Q4KMQ2 910 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 EAPPQ56P03 285 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 DNTTIP2Q5QJE6 756 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 MYH8P13535 1937 aa14.52□□□□□ -0.08
CDK5RAP3-217ENST00000580287 PPP1R11O60927 126 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TOB1P50616 345 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 IKQ13123 557 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ASPRV1Q53RT3 343 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 WRNIP1Q96S55 665 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 GOLPH3LQ9H4A5 285 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
CDK5RAP3-217ENST00000580287 KINO60870 393 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 ZNF341Q9BYN7 854 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 PRDM4Q9UKN5 801 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 TMEM232C9JQI7 657 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 STXBP3O00186 592 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 XBP1P17861 261 aa14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 MARCKSP29966 332 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-217ENST00000580287 FAM200AQ8TCP9 573 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms