RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 PLIN4Q96Q06 1357 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 TMEM265A0A087WTH1 108 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 ATP2A1O14983 1001 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 ZBED4O75132 1171 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 PGK2P07205 417 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 FDX1P10109 184 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 OAZ1P54368 228 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 SMAD3P84022 425 aaKnown RBP15.93■□□□□ 0.14
TRAF4-214ENST00000580073 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 CCDC174Q6PII3 467 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 ZNF444Q8N0Y2 327 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-214ENST00000580073 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 STRBPQ96SI9 672 aaKnown RBP15.93■□□□□ 0.14
TRAF4-214ENST00000580073 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
TRAF4-214ENST00000580073 A0A1W2PQ45 241 aaPredicted RBP15.92■□□□□ 0.14
TRAF4-214ENST00000580073 A0A1W2PQY0 241 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 MINDY4BA8MYZ0 360 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 ERC2O15083 957 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 NDUFB10O96000 172 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 RASA1P20936 1047 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 PDE4BQ07343 736 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAF4-214ENST00000580073 REPS2Q8NFH8 660 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 BADQ92934 168 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 STARD7Q9NQZ5 370 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 FEM1BQ9UK73 627 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
TRAF4-214ENST00000580073 DCDC2CA8MYV0 355 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 RNF113AO15541 343 aaKnown RBP15.91■□□□□ 0.14
TRAF4-214ENST00000580073 GPAA1O43292 621 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 TTLL1O95922 423 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 PGK1P00558 417 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 APPP05067 770 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 ZNF865P0CJ78 1059 aaPredicted RBP15.91■□□□□ 0.14
TRAF4-214ENST00000580073 RAG1P15918 1043 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 SHHQ15465 462 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAF4-214ENST00000580073 SMC5Q8IY18 1101 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 PCSK9Q8NBP7 692 aaKnown RBP15.91■□□□□ 0.14
TRAF4-214ENST00000580073 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
TRAF4-214ENST00000580073 TOX2Q96NM4 488 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 GUCD1Q96NT3 240 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 TTC41PQ6P2S7 1318 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 SYNRGQ9UMZ2 1314 aa15.91■□□□□ 0.14
TRAF4-214ENST00000580073 GSG1L2A8MUP6 293 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 F5H6K3 240 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 KIAA0355O15063 1070 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
TRAF4-214ENST00000580073 TLE2Q04725 743 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 FPGSQ05932 587 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 KLRC3Q07444 240 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 MAMDC4Q6UXC1 1216 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 ANKRD35Q8N283 1001 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 GMCL1P1Q8NEA9 526 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
TRAF4-214ENST00000580073 GLT1D1Q96MS3 346 aa15.9■□□□□ 0.14
TRAF4-214ENST00000580073 RWDD1Q9H446 243 aaPredicted RBP15.9■□□□□ 0.14
TRAF4-214ENST00000580073 ZHX1Q9UKY1 873 aaPredicted RBP15.9■□□□□ 0.14
TRAF4-214ENST00000580073 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
TRAF4-214ENST00000580073 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 CST5P28325 142 aaPredicted RBP15.89■□□□□ 0.13
TRAF4-214ENST00000580073 ACLYP53396 1101 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 KIFC2Q96AC6 838 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 FAM161BQ96MY7 647 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRAF4-214ENST00000580073 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 SLC38A10Q9HBR0 1119 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 TMEM39AQ9NV64 488 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 CLIP2Q9UDT6 1046 aa15.89■□□□□ 0.13
TRAF4-214ENST00000580073 DNAJC25-GNG10A0A024R161 153 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 TRIM43BA6NCK2 446 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 STAT2P52630 851 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 C9orf50Q5SZB4 431 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 ANKRD45Q5TZF3 282 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 FAM160B2Q86V87 743 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 OSBP2Q969R2 916 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 MKL1Q969V6 931 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 TRIM43Q96BQ3 446 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-214ENST00000580073 NUP88Q99567 741 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-214ENST00000580073 NAPBQ9H115 298 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 MTMR4Q9NYA4 1195 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
TRAF4-214ENST00000580073 GBF1Q92538 1859 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 ELP1O95163 1332 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 SALL3Q9BXA9 1300 aa15.88■□□□□ 0.13
TRAF4-214ENST00000580073 IGKV6D-41A0A0C4DH26 115 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 SMIM22K7EJ46 135 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 TLR3O15455 904 aaKnown RBP15.87■□□□□ 0.13
TRAF4-214ENST00000580073 CHGBP05060 677 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 C6orf222P0C671 652 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-214ENST00000580073 SLC4A3P48751 1232 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 IKQ13123 557 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms