RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
MSI2-208ENST00000579466 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 HAUS7Q99871 368 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
MSI2-208ENST00000579466 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 ADAMTS5Q9UNA0 930 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 RIPK3Q9Y572 518 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
MSI2-208ENST00000579466 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
MSI2-208ENST00000579466 GBF1Q92538 1859 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 SPTBN5Q9NRC6 3674 aaKnown RBP11.53□□□□□ -0.56
MSI2-208ENST00000579466 DCDC2CA8MYV0 355 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 KIAA0355O15063 1070 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 RAB11FIP3O75154 756 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 PRDM1O75626 825 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 NDUFB10O96000 172 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 C6orf222P0C671 652 aaPredicted RBP11.53□□□□□ -0.56
MSI2-208ENST00000579466 RASA1P20936 1047 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 DNAJB2P25686 324 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 FAAP100Q0VG06 881 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 UBE3CQ15386 1083 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 USP38Q8NB14 1042 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
MSI2-208ENST00000579466 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 MKNK2Q9HBH9 465 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 RAVER2Q9HCJ3 691 aaKnown RBP11.53□□□□□ -0.56
MSI2-208ENST00000579466 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
MSI2-208ENST00000579466 F5H6K3 240 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 ADCY6O43306 1168 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 SNAI1O95863 264 aaPredicted RBP11.52□□□□□ -0.57
MSI2-208ENST00000579466 COPB2P35606 906 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 KLRC3Q07444 240 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 KCNA10Q16322 511 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 ZSCAN25Q6NSZ9 544 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 MIER1Q8N108 512 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
MSI2-208ENST00000579466 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■■■□□ 17.6
MSI2-208ENST00000579466 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
MSI2-208ENST00000579466 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
MSI2-208ENST00000579466 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 GRXCR1A8MXD5 290 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 ZBED4O75132 1171 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 ACRP10323 421 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 MS4A1P11836 297 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 TDO2P48775 406 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 TIFAQ96CG3 184 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 LRRCC1Q9C099 1032 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
MSI2-208ENST00000579466 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
MSI2-208ENST00000579466 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 TIMP1P01033 207 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 APPP05067 770 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 ASGR1P07306 291 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 CSF2RAP15509 400 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 PBX2P40425 430 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 BEX3Q00994 111 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 CCDC144BQ3MJ40 725 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 NOL8Q76FK4 1167 aaKnown RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 ARMCX2Q7L311 632 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 ANKRD33Q7Z3H0 272 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 KLHDC9Q8NEP7 349 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 TSEN34Q9BSV6 310 aaKnown RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 TBX21Q9UL17 535 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 DDX49Q9Y6V7 483 aaKnown RBP11.5□□□□□ -0.57
MSI2-208ENST00000579466 SYNGAP1Q96PV0 1343 aa11.5□□□□□ -0.57
MSI2-208ENST00000579466 DNAJC25-GNG10A0A024R161 153 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 TMEM265A0A087WTH1 108 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 GSG1L2A8MUP6 293 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 GPAA1O43292 621 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 DUSP11O75319 330 aaKnown RBP11.49□□□□□ -0.57
MSI2-208ENST00000579466 PTGS1P23219 599 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
MSI2-208ENST00000579466 GNASQ5JWF2 1037 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
MSI2-208ENST00000579466 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
MSI2-208ENST00000579466 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 CEP95Q96GE4 821 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 FGD4Q96M96 766 aa11.49□□□□□ -0.57
MSI2-208ENST00000579466 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms