RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 AGTPBP1Q9UPW5 1226 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 TESPA1A2RU30 521 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 BTBD19C9JJ37 291 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 WDR46O15213 610 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 FMNL1O95466 1100 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 CDC27P30260 824 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 DDIT3P35638 169 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 INHBEP58166 350 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 ST3GAL1Q11201 340 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 MOGSQ13724 837 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 TREML2Q5T2D2 321 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-209ENST00000578904 STX6O43752 255 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 DEXIO95424 95 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 SLC1A4P43007 532 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 PABPC4Q13310 644 aaKnown RBP eCLIP16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 OTUD7BQ6GQQ9 843 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 RASGRP2Q7LDG7 609 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 IFNL1Q8IU54 200 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 NUP88Q99567 741 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
CSNK1D-209ENST00000578904 BAZ2BQ9UIF8 2168 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 IGF2BP3O00425 579 aaKnown RBP eCLIP16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 JAK2O60674 1132 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 CTDNEP1O95476 244 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 SYT1P21579 422 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 TM4SF4P48230 202 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 NTRK3Q16288 839 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 GPAT2Q6NUI2 795 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 FAM43AQ8N2R8 423 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 PTPN18Q99952 460 aa16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L15C9J2P7 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L13C9JLJ4 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L11C9JVI0 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 KLRF2D3W0D1 207 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L18D6R9N7 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L22D6RA61 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L17D6RBQ6 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L19D6RCP7 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L20D6RJB6 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 PDHXO00330 501 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 PDHBP11177 359 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 BMP3P12645 472 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 USP17L24Q0WX57 530 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 PRDM10Q9NQV6 1147 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 SLC45A1Q9Y2W3 748 aa16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-209ENST00000578904 VPS37CA5D8V6 355 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 SNHG28P0DPA3 235 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 OSBPP22059 807 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 PARK7Q99497 189 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 ALG1Q9BT22 464 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 ZCCHC17Q9NP64 241 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-209ENST00000578904 FOXN1O15353 648 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 FLOT1O75955 427 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 BRD1O95696 1058 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 ALDH1A1P00352 501 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 ZSCAN22P10073 491 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 HOXA7P31268 230 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 TRAF1Q13077 416 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 SAFBQ15424 915 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 PHKBQ93100 1093 aa16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 RRP36Q96EU6 259 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 ZSCAN16Q9H4T2 348 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-209ENST00000578904 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 GOLGA8HP0CJ92 632 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 STAT2P52630 851 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 MAP2K1Q02750 393 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 SRBD1Q8N5C6 995 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms