RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 MFSD5Q6N075 450 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 TATDN1Q6P1N9 297 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 CERS3Q8IU89 383 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 NUP133Q8WUM0 1156 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 MAML3Q96JK9 1138 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 SPATC1LQ9H0A9 340 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 EHD4Q9H223 541 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 MTIF3Q9H2K0 278 aaKnown RBP8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 MROH8Q9H579 483 aa8.8□□□□□ -1
CDK5RAP3-209ENST00000578663 MOXD2PA6NHM9 499 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 C19orf67A6NJJ6 358 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 COBLO75128 1261 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 ADAMTS4O75173 837 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 UQCRFS1P1P0C7P4 283 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 ERCC3P19447 782 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 DSG3P32926 999 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 ZYXQ15942 572 aaKnown RBP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 PI16Q6UXB8 463 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 MAPKAPK5Q8IW41 473 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 TGFBRAP1Q8WUH2 860 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 RPAP3Q9H6T3 665 aaPredicted RBP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 UBE2ZQ9H832 354 aaPredicted RBP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 CERS4Q9HA82 394 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 AATFQ9NY61 560 aaKnown RBP eCLIP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 LRP2BPQ9P2M1 347 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 PALD1Q9ULE6 856 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 PA2G4Q9UQ80 394 aaKnown RBP8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 ZBED9Q6R2W3 1325 aa8.79□□□□□ -1
CDK5RAP3-209ENST00000578663 MYH1P12882 1939 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 H0Y858 1186 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 LPXNO60711 386 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 AKR1A1P14550 325 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 CSF2RAP15509 400 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 MCAMP43121 646 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 ZP2Q05996 745 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 COG2Q14746 738 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 TMEM199Q8N511 208 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 FSD1Q9BTV5 496 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 STARD7Q9NQZ5 370 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 TLR9Q9NR96 1032 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 SERPINB13Q9UIV8 391 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 DIS3Q9Y2L1 958 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 ELP1O95163 1332 aa8.78□□□□□ -1
CDK5RAP3-209ENST00000578663 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SLC25A27O95847 323 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PGK1P00558 417 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FCER1AP12319 257 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CST5P28325 142 aaPredicted RBP8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NBL1P41271 181 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ACLYP53396 1101 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 VCPP55072 806 aaKnown RBP8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TFCP2Q12800 502 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MTX1Q13505 466 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 RAB3GAP1Q15042 981 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ABCB5Q2M3G0 1257 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 HERC4Q5GLZ8 1057 aaPredicted RBP8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PRAMEF19Q5SWL8 479 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GORABQ5T7V8 394 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ADSSL1Q8N142 457 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 KLHDC9Q8NEP7 349 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ACER1Q8TDN7 264 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CABP5Q9NP86 173 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MUTYHQ9UIF7 546 aa8.77□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PARP14Q460N5 1801 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNF865P0CJ78 1059 aaPredicted RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 IRS1P35568 1242 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 COPB2P35606 906 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CDK7P50613 346 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SLFN5Q08AF3 891 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GRB10Q13322 594 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CERKLQ49MI3 558 aaPredicted RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CCSAPQ6IQ19 270 aaPredicted RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TMED8Q6PL24 325 aaPredicted RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MSL3Q8N5Y2 521 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SSH1Q8WYL5 1049 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PBXIP1Q96AQ6 731 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GLT1D1Q96MS3 346 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TINF2Q9BSI4 451 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 IRF2BPLQ9H1B7 796 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 IL23AQ9NPF7 189 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SAP30BPQ9UHR5 308 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PCDHA11Q9Y5I1 949 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SYNRGQ9UMZ2 1314 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ATG2AQ2TAZ0 1938 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNFX1Q9P2E3 1918 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZZEF1O43149 2961 aa8.76□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SIP14410 1827 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SCN5AQ14524 2016 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TMEM221A6NGB7 291 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 E9PSI1 815 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 M0R296 226 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 KCNA5P22460 613 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PKN1Q16512 942 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms