RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 AFG3L2Q9Y4W6 797 aa15.5■□□□□ 0.07
SRSF1-202ENST00000578430 ZHX2Q9Y6X8 837 aa15.5■□□□□ 0.07
SRSF1-202ENST00000578430 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 PPFIA3O75145 1194 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 STAT2P52630 851 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 TRAF1Q13077 416 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 SAFBQ15424 915 aaKnown RBP eCLIP15.49■□□□□ 0.07
SRSF1-202ENST00000578430 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 SH3D19Q5HYK7 790 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 RASGRP2Q7LDG7 609 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 CCDC12Q8WUD4 166 aaPredicted RBP15.49■□□□□ 0.07
SRSF1-202ENST00000578430 TNPO1Q92973 898 aaKnown RBP15.49■□□□□ 0.07
SRSF1-202ENST00000578430 UBA5Q9GZZ9 404 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 ISY1Q9ULR0 285 aaKnown RBP15.49■□□□□ 0.07
SRSF1-202ENST00000578430 FZD1Q9UP38 647 aa15.49■□□□□ 0.07
SRSF1-202ENST00000578430 PHIPQ8WWQ0 1821 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 OTOFQ9HC10 1997 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 PNMA6FA0A0J9YX94 578 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 TMEM232C9JQI7 657 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 TRAF5O00463 557 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 CXCL11O14625 94 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 CALML3P27482 149 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 IKQ13123 557 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-202ENST00000578430 MTMR2Q13614 643 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 SYDE2Q5VT97 1194 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 KRT40Q6A162 431 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 GALNT17Q6IS24 598 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 CCDC84Q86UT8 332 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-202ENST00000578430 SPICE1Q8N0Z3 855 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 C2orf69Q8N8R5 385 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 CCDC148Q8NFR7 591 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 AIFM3Q96NN9 605 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 JMJD4Q9H9V9 463 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 TMOD4Q9NZQ9 345 aa15.48■□□□□ 0.07
SRSF1-202ENST00000578430 ZBTB5O15062 677 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 MMP1P03956 469 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 FDX1P10109 184 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 PPIL2Q13356 520 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 ZYXQ15942 572 aaKnown RBP15.47■□□□□ 0.07
SRSF1-202ENST00000578430 KIAA1755Q5JYT7 1200 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 PPP1R18Q6NYC8 613 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 PIGSQ96S52 555 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 NUP88Q99567 741 aaPredicted RBP15.47■□□□□ 0.07
SRSF1-202ENST00000578430 PHF20Q9BVI0 1012 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 GBA2Q9HCG7 927 aaPredicted RBP15.47■□□□□ 0.07
SRSF1-202ENST00000578430 VAT1LQ9HCJ6 419 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 BRMS1Q9HCU9 246 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 EMILIN3Q9NT22 766 aa15.47■□□□□ 0.07
SRSF1-202ENST00000578430 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-202ENST00000578430 SLC16A2P36021 539 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 GUCY1B3Q02153 619 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 RESTQ13127 1097 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 ATL3Q6DD88 541 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 TEX2Q8IWB9 1127 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 FOXP1Q9H334 677 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-202ENST00000578430 CPVLQ9H3G5 476 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 ZNF408Q9H9D4 720 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 KCNH4Q9UQ05 1017 aa15.46■□□□□ 0.07
SRSF1-202ENST00000578430 hCG_1642624A0A1W2PR95 340 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 UBE2Q2LH0YL09 131 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 STXBP3O00186 592 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 CELF2O95319 508 aaKnown RBP15.45■□□□□ 0.06
SRSF1-202ENST00000578430 VCAM1P19320 739 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.067e-14■■■□□ 17.3
SRSF1-202ENST00000578430 FOSBP53539 338 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 NLRP5P59047 1200 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 KIF23Q02241 960 aaPredicted RBP15.45■□□□□ 0.06
SRSF1-202ENST00000578430 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 MOB2Q70IA6 237 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
SRSF1-202ENST00000578430 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 SLC10A4Q96EP9 437 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 GLT8D2Q9H1C3 349 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 VPS54Q9P1Q0 977 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
SRSF1-202ENST00000578430 BAZ2BQ9UIF8 2168 aaKnown RBP15.45■□□□□ 0.06
SRSF1-202ENST00000578430 GNA11P29992 359 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 HMGCS2P54868 508 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
SRSF1-202ENST00000578430 CDC37Q16543 378 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-202ENST00000578430 FOXD4L5Q5VV16 416 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-202ENST00000578430 WWC2Q6AWC2 1192 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 OTUD7BQ6GQQ9 843 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 DAGLBQ8NCG7 672 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-202ENST00000578430 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-202ENST00000578430 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms