RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 ZNF576Q9H609 170 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 ROBO3Q96MS0 1386 aa16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 GRXCR1A8MXD5 290 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 TIMP1P01033 207 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 COPB2P35606 906 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 KLHDC9Q8NEP7 349 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 TOX2Q96NM4 488 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 SLF1Q9BQI6 1058 aa16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
UPF3AP2-202ENST00000578315 ADCY6O43306 1168 aa16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 C6orf222P0C671 652 aaPredicted RBP16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 PBX2P40425 430 aa16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 TEX13BQ9BXU2 312 aa16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
UPF3AP2-202ENST00000578315 MOXD2PA6NHM9 499 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 ACRP10323 421 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 ATP5JP18859 108 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 TJAP1Q5JTD0 557 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 MFSD5Q6N075 450 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 HAUS7Q99871 368 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 PPP1R12CQ9BZL4 782 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 TBX21Q9UL17 535 aa16.32■□□□□ 0.2
UPF3AP2-202ENST00000578315 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 F5H6K3 240 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 HMMRO75330 724 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 ASGR1P07306 291 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 CSF2RAP15509 400 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 KLRC3Q07444 240 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 TMEM240Q5SV17 173 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 MAMDC4Q6UXC1 1216 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 MSL3Q8N5Y2 521 aaKnown RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 PBX4Q9BYU1 374 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
UPF3AP2-202ENST00000578315 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 NDUFB10O96000 172 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 RASA1P20936 1047 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 CDK7P50613 346 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
UPF3AP2-202ENST00000578315 ELP1O95163 1332 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 MROH7Q68CQ1 1323 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 TNFRSF10AO00220 468 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 ZBED4O75132 1171 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 CCDC85BQ15834 202 aaPredicted RBP16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 ZNF365Q70YC5 407 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 PCSK9Q8NBP7 692 aaKnown RBP16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 SPC25Q9HBM1 224 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 NYAP2Q9P242 653 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 MYH7P12883 1935 aa16.29■□□□□ 0.2
UPF3AP2-202ENST00000578315 A0A0U1RQG5 324 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 ARVCFO00192 962 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 CYP2C18P33260 490 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 BEX3Q00994 111 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 TMEM199Q8N511 208 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 FGD4Q96M96 766 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 STRBPQ96SI9 672 aaKnown RBP16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 ABHD16BQ9H3Z7 469 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
UPF3AP2-202ENST00000578315 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.2
UPF3AP2-202ENST00000578315 MUC3AQ02505 3323 aa16.27■□□□□ 0.2
UPF3AP2-202ENST00000578315 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms