RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 PRPF38AQ8NAV1 312 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-207ENST00000578134 FBXO18Q8NFZ0 1043 aa19.59■□□□□ 0.73
CDK5RAP3-207ENST00000578134 OPTNQ96CV9 577 aa19.59■□□□□ 0.73
CDK5RAP3-207ENST00000578134 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
CDK5RAP3-207ENST00000578134 PNMA2Q9UL42 364 aa19.59■□□□□ 0.73
CDK5RAP3-207ENST00000578134 A0A0G2JLL6 359 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZBTB5O15062 677 aa19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 VCAM1P19320 739 aa19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HMGCS2P54868 508 aa19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 IKQ13123 557 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PRRT2Q7Z6L0 340 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CCDC12Q8WUD4 166 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 OTUD5Q96G74 571 aa19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PHIPQ8WWQ0 1821 aa19.58■□□□□ 0.72
CDK5RAP3-207ENST00000578134 TRPM7Q96QT4 1865 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L15C9J2P7 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L13C9JLJ4 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L11C9JVI0 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L18D6R9N7 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L22D6RA61 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L17D6RBQ6 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L19D6RCP7 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L20D6RJB6 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 IRF6O14896 467 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 BRD1O95696 1058 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZBTB48P10074 688 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 USP17L24Q0WX57 530 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 GALNT17Q6IS24 598 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 NUP88Q99567 741 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
CDK5RAP3-207ENST00000578134 MYPNQ86TC9 1320 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 OTOFQ9HC10 1997 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZSCAN22P10073 491 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SLC16A2P36021 539 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 GTF2A2P52657 109 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HUNKP57058 714 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PABPC4Q13310 644 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SAFBQ15424 915 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SLC35G1Q2M3R5 365 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 TEX2Q8IWB9 1127 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CCDC148Q8NFR7 591 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PIGSQ96S52 555 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SLF1Q9BQI6 1058 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 RPAP3Q9H6T3 665 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 BARHL2Q9NY43 387 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PRR12Q9ULL5 1215 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ATP6V1DQ9Y5K8 247 aa19.56■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CALML3P27482 149 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 COG2Q14746 738 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZNF784Q8NCA9 323 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 WNK4Q96J92 1243 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HHIPL1Q96JK4 782 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 MTMR6Q9Y217 621 aa19.55■□□□□ 0.72
CDK5RAP3-207ENST00000578134 VPS37CA5D8V6 355 aaPredicted RBP19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CETPP11597 493 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 KRT40Q6A162 431 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PPP1R18Q6NYC8 613 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SAPCD2Q86UD0 394 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 GLT8D2Q9H1C3 349 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 RANBP17Q9H2T7 1088 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CPVLQ9H3G5 476 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PPP1R9AQ9ULJ8 1098 aa19.54■□□□□ 0.72
CDK5RAP3-207ENST00000578134 TMEM88BA6NKF7 163 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 FLOT1O75955 427 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CDC37Q16543 378 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SPRYD7Q5W111 196 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 KIFC2Q96AC6 838 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 AMNQ9BXJ7 453 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 TLL2Q9Y6L7 1015 aa19.53■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ESYT2A0FGR8 921 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZBED4O75132 1171 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 MMP1P03956 469 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 GNA11P29992 359 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 DSG3P32926 999 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 QRICH1Q2TAL8 776 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 RGMBQ6NW40 437 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 HEATR3Q7Z4Q2 680 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 FBXO11Q86XK2 927 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CCDC102AQ96A19 550 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 PHF20Q9BVI0 1012 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 ADAMTS5Q9UNA0 930 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 AGTPBP1Q9UPW5 1226 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 SLC45A1Q9Y2W3 748 aa19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 CTDP1Q9Y5B0 961 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-207ENST00000578134 hCG_1642624A0A1W2PR95 340 aa19.51■□□□□ 0.71
CDK5RAP3-207ENST00000578134 DTNBO60941 627 aa19.51■□□□□ 0.71
CDK5RAP3-207ENST00000578134 F13A1P00488 732 aa19.51■□□□□ 0.71
CDK5RAP3-207ENST00000578134 OAZ1P54368 228 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms