RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TAF1DQ9H5J8 278 aaPredicted RBP21.34■■□□□ 1.01
PRKCA-203ENST00000578063 DOCK1Q14185 1865 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 SLC16A2P36021 539 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 NR5A1Q13285 461 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 BTNL9Q6UXG8 535 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 PNMA8AQ86V59 439 aaPredicted RBP21.33■■□□□ 1.01
PRKCA-203ENST00000578063 DAGLBQ8NCG7 672 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 OXER1Q8TDS5 423 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 PICK1Q9NRD5 415 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 RCOR1Q9UKL0 485 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 PCDHA4Q9UN74 947 aa21.33■■□□□ 1.01
PRKCA-203ENST00000578063 BAZ2BQ9UIF8 2168 aaKnown RBP21.33■■□□□ 1.01
PRKCA-203ENST00000578063 ADM5C9JUS6 153 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 ZBTB5O15062 677 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 YEATS4O95619 227 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 NASPP49321 788 aaPredicted RBP21.32■■□□□ 1
PRKCA-203ENST00000578063 NAPAP54920 295 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 RILPL1Q5EBL4 403 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 PPP1R18Q6NYC8 613 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 NUP88Q99567 741 aaPredicted RBP21.32■■□□□ 1
PRKCA-203ENST00000578063 ESYT2A0FGR8 921 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 TMEM232C9JQI7 657 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 NOL9Q5SY16 702 aaKnown RBP21.32■■□□□ 1
PRKCA-203ENST00000578063 BLIDQ8IZY5 108 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 SPICE1Q8N0Z3 855 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 GLIS2Q9BZE0 524 aaPredicted RBP21.32■■□□□ 1
PRKCA-203ENST00000578063 FTOQ9C0B1 505 aaKnown RBP eCLIP21.32■■□□□ 1
PRKCA-203ENST00000578063 KIAA1683Q9H0B3 1180 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 ZMYND12Q9H0C1 365 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 AS3MTQ9HBK9 375 aa21.32■■□□□ 1
PRKCA-203ENST00000578063 USP17L10C9JJH3 530 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 GADD45BO75293 160 aaPredicted RBP21.31■■□□□ 1
PRKCA-203ENST00000578063 CEBPZQ03701 1054 aaKnown RBP21.31■■□□□ 1
PRKCA-203ENST00000578063 IKQ13123 557 aaPredicted RBP21.31■■□□□ 1
PRKCA-203ENST00000578063 SYDE2Q5VT97 1194 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 ANO1Q5XXA6 986 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
PRKCA-203ENST00000578063 GPT2Q8TD30 523 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 LPAR1Q92633 364 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 TNFRSF25Q93038 417 aa21.31■■□□□ 1
PRKCA-203ENST00000578063 GNA11P29992 359 aa21.3■■□□□ 1
PRKCA-203ENST00000578063 STAT2P52630 851 aa21.3■■□□□ 1
PRKCA-203ENST00000578063 EAPPQ56P03 285 aaPredicted RBP21.3■■□□□ 1
PRKCA-203ENST00000578063 KCNG4Q8TDN1 519 aa21.3■■□□□ 1
PRKCA-203ENST00000578063 WDR18Q9BV38 432 aa21.3■■□□□ 1
PRKCA-203ENST00000578063 C6orf50Q9HD87 102 aa21.3■■□□□ 1
PRKCA-203ENST00000578063 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
PRKCA-203ENST00000578063 PLA2G6O60733 806 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 STK38Q15208 465 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 ZYXQ15942 572 aaKnown RBP21.29■■□□□ 1
PRKCA-203ENST00000578063 CDC37Q16543 378 aaPredicted RBP21.29■■□□□ 1
PRKCA-203ENST00000578063 KIAA1755Q5JYT7 1200 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 LINC00301Q8NCQ3 95 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.29■■□□□ 1
PRKCA-203ENST00000578063 ZKSCAN4Q969J2 545 aaPredicted RBP21.29■■□□□ 1
PRKCA-203ENST00000578063 NOL7Q9UMY1 257 aaKnown RBP21.29■■□□□ 1
PRKCA-203ENST00000578063 CLIC4Q9Y696 253 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 GOLGA6L4A6NEF3 574 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 POTECB2RU33 542 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 PTPRAP18433 802 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 NF2P35240 595 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 USP14P54578 494 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 FAM160B2Q86V87 743 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 BICD2Q8TD16 824 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 CHURC1Q8WUH1 139 aa21.29■■□□□ 1
PRKCA-203ENST00000578063 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
PRKCA-203ENST00000578063 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
PRKCA-203ENST00000578063 QRICH1Q2TAL8 776 aa21.28■■□□□ 1
PRKCA-203ENST00000578063 SMCO2A6NFE2 343 aa21.27■■□□□ 1
PRKCA-203ENST00000578063 TRAPPC10P48553 1259 aa21.27■■□□□ 1
PRKCA-203ENST00000578063 SF3A1Q15459 793 aaKnown RBP21.27■■□□□ 1
PRKCA-203ENST00000578063 CDCA5Q96FF9 252 aa21.27■■□□□ 1
PRKCA-203ENST00000578063 FEM1BQ9UK73 627 aa21.27■■□□□ 1
PRKCA-203ENST00000578063 POLR2AP24928 1970 aaKnown RBP21.27■■□□□ 1
PRKCA-203ENST00000578063 M0R2N6 131 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 SPTLC2O15270 562 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 PPP1R11O60927 126 aaPredicted RBP21.26■□□□□ 0.99
PRKCA-203ENST00000578063 TOB1P50616 345 aaPredicted RBP21.26■□□□□ 0.99
PRKCA-203ENST00000578063 MAP3K9P80192 1104 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 SLC39A14Q15043 492 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 ZNF280CQ8ND82 737 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 PRR12Q9ULL5 1215 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 FZD1Q9UP38 647 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 ME1P48163 572 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 IREB2P48200 963 aaKnown RBP21.26■□□□□ 0.99
PRKCA-203ENST00000578063 ADCY7P51828 1080 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 TRAF1Q13077 416 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 MTMR2Q13614 643 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 JMYQ8N9B5 988 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 COA7Q96BR5 231 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 CEP131Q9UPN4 1083 aa21.26■□□□□ 0.99
PRKCA-203ENST00000578063 CCDC194A0A1B0GVG4 234 aa21.25■□□□□ 0.99
PRKCA-203ENST00000578063 BACE1P56817 501 aa21.25■□□□□ 0.99
PRKCA-203ENST00000578063 SPP2Q13103 211 aa21.25■□□□□ 0.99
PRKCA-203ENST00000578063 PRKG1Q13976 671 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms