RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 GUCY2FP51841 1108 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 KRT71Q3SY84 523 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 LCORLQ8N3X6 602 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 HEG1Q9ULI3 1381 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 TRAPPC10P48553 1259 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 NLRP10Q86W26 655 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 ACRBPQ8NEB7 543 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 CTTNBP2NLQ9P2B4 639 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 BUB1O43683 1085 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 SP4Q02446 784 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 LSM14BQ9BX40 385 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 SRPRBQ9Y5M8 271 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 GCNT3O95395 438 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 C6orf163Q5TEZ5 329 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 FAM71BQ8TC56 605 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 PIH1D3Q9NQM4 214 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
RNF43-203ENST00000577716 ARHGEF35A5YM69 484 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 B4DLN1 442 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 GNGT1P63211 74 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 BCAS4Q8TDM0 211 aa12.07□□□□□ -0.48
RNF43-203ENST00000577716 MRPL44Q9H9J2 332 aaKnown RBP12.07□□□□□ -0.48
RNF43-203ENST00000577716 EXOC3O60645 756 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 DNAI2Q9GZS0 605 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 NKIRAS1Q9NYS0 192 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 KIAA1210Q9ULL0 1709 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 KCNK3O14649 394 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 CYP27B1O15528 508 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 PNMA6AP0CW24 399 aaPredicted RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 PTPROQ16827 1216 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 GALNT17Q6IS24 598 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 MAEAQ7L5Y9 396 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 FAM170AA1A519 330 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 EEF1GP26641 437 aaKnown RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 MCAMP43121 646 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 USH1GQ495M9 461 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
RNF43-203ENST00000577716 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 ARMCX3Q9UH62 379 aaPredicted RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
RNF43-203ENST00000577716 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 ZMYND10O75800 440 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 POLR2FP61218 127 aaKnown RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 SF3A3Q12874 501 aaKnown RBP eCLIP12.05□□□□□ -0.489e-18■■□□□ 11.4
RNF43-203ENST00000577716 UBL4BQ8N7F7 174 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 TTLL11Q8NHH1 800 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 IL25Q9H293 177 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 CPS1P31327 1500 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 USP27XA6NNY8 438 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 KRT5P13647 590 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 BIRC3Q13489 604 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 CEP85LQ5SZL2 805 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 CCDC169A6NNP5 214 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 E7EVH7 732 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 BACH1O14867 736 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 GNA14O95837 355 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 PTPREP23469 700 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 DDIT3P35638 169 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 STAT1P42224 750 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 ARHGAP44Q17R89 818 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 SYCE1Q8N0S2 351 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 PPANQ9NQ55 473 aaKnown RBP12.05□□□□□ -0.48
RNF43-203ENST00000577716 PIK3C2BO00750 1634 aa12.05□□□□□ -0.48
RNF43-203ENST00000577716 TOM1O60784 492 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 TCP10Q12799 353 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF43-203ENST00000577716 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
RNF43-203ENST00000577716 FAM204AQ9H8W3 233 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms