RNA–Protein interactions for RNA: ENST00000577640.1

UBB-205, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-205ENST00000577640 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
UBB-205ENST00000577640 PRDM5Q9NQX1 630 aaPredicted RBP12.48□□□□□ -0.41
UBB-205ENST00000577640 PLIN4Q96Q06 1357 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 TMEM265A0A087WTH1 108 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 A0A1W2PQ45 241 aaPredicted RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 A0A1W2PQY0 241 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 TRIM43BA6NCK2 446 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 RNF113AO15541 343 aaKnown RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 SMARCA5O60264 1052 aaPredicted RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 NDUFB10O96000 172 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 CLTBP09497 229 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 FDX1P10109 184 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 SNRNP48Q6IEG0 339 aaKnown RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 ANKRD33Q7Z3H0 272 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 KLHDC9Q8NEP7 349 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 TRIM43Q96BQ3 446 aaPredicted RBP12.47□□□□□ -0.41
UBB-205ENST00000577640 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
UBB-205ENST00000577640 A0A0C4DFX4 3053 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 MINDY4BA8MYZ0 360 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 GPAA1O43292 621 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 DUSP11O75319 330 aaKnown RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 PGK1P00558 417 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 CST5P28325 142 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 CCSAPQ6IQ19 270 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 ZNF444Q8N0Y2 327 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 NUP133Q8WUM0 1156 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 DDX11Q96FC9 970 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 SLC38A10Q9HBR0 1119 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
UBB-205ENST00000577640 FBXO40Q9UH90 709 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 FEM1BQ9UK73 627 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 RIPK3Q9Y572 518 aa12.46□□□□□ -0.41
UBB-205ENST00000577640 TTC41PQ6P2S7 1318 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 SYNRGQ9UMZ2 1314 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
UBB-205ENST00000577640 RAD21O60216 631 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 ZBED4O75132 1171 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 TTLL1O95922 423 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 ITGB8P26012 769 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 ACLYP53396 1101 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 NKX3-2P78367 333 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBB-205ENST00000577640 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
UBB-205ENST00000577640 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 ABHD16BQ9H3Z7 469 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
UBB-205ENST00000577640 ELP1O95163 1332 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 MROH7Q68CQ1 1323 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 CDH23Q9H251 3354 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 RAG1P15918 1043 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 TDO2P48775 406 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 FAAP100Q0VG06 881 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 PCSK9Q8NBP7 692 aaKnown RBP12.44□□□□□ -0.42
UBB-205ENST00000577640 NEDD1Q8NHV4 660 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 CEP95Q96GE4 821 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
UBB-205ENST00000577640 NACAP1Q9BZK3 213 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 STARD7Q9NQZ5 370 aa12.44□□□□□ -0.42
UBB-205ENST00000577640 LCTP09848 1927 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 DCDC2CA8MYV0 355 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 M0R2C6 588 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 GJA9P57773 515 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 FPGSQ05932 587 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 PDE4BQ07343 736 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 FGD4Q96M96 766 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 GLT1D1Q96MS3 346 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 FAM161BQ96MY7 647 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
UBB-205ENST00000577640 TMEM39AQ9NV64 488 aa12.43□□□□□ -0.42
UBB-205ENST00000577640 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
UBB-205ENST00000577640 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
UBB-205ENST00000577640 EYSQ5T1H1 3165 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 ERC2O15083 957 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 PLA2G6O60733 806 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
UBB-205ENST00000577640 TIMP1P01033 207 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 APPP05067 770 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
UBB-205ENST00000577640 TSPY3P0CV98 308 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 TSPY8P0CW00 308 aa12.42□□□□□ -0.42
UBB-205ENST00000577640 BMP3P12645 472 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms